RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 GCSHP23434 173 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 UBE2D1P51668 147 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 KRTAP24-1Q3LI83 254 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 SCGB1D4Q6XE38 83 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 HIST1H4GQ99525 98 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-207ENST00000551216 A8MZ25 164 aa10.24□□□□□ -0.77
SCN8A-207ENST00000551216 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-207ENST00000551216 Q6ZUT4 128 aa10.24□□□□□ -0.77
SCN8A-207ENST00000551216 ATRQ13535 2644 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 UBE2L6O14933 153 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 HERVK_113P63121 156 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
SCN8A-207ENST00000551216 PRO0255Q9UI72 69 aa10.23□□□□□ -0.77
SCN8A-207ENST00000551216 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 C9orf118A6NHY6 69 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 A6NJY4 79 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 UBE2V1Q13404 147 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 C3orf56Q8N813 242 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 RNF183Q96D59 192 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 A0A0J9YY99 117 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 TEX48A0A1B0GUV7 120 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 IGHV4-30-4P0DP06 118 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 FXYD2P54710 66 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 EGFEM1PQ0D2K5 195 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 CDC42SE2Q9NRR3 84 aa10.22□□□□□ -0.77
SCN8A-207ENST00000551216 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.78
SCN8A-207ENST00000551216 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.78
SCN8A-207ENST00000551216 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.78
SCN8A-207ENST00000551216 A0A1B0GWB2 263 aa10.2□□□□□ -0.78
SCN8A-207ENST00000551216 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
SCN8A-207ENST00000551216 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
SCN8A-207ENST00000551216 VSIG2Q96IQ7 327 aa10.2□□□□□ -0.78
SCN8A-207ENST00000551216 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
SCN8A-207ENST00000551216 VAMP3Q15836 100 aa10.19□□□□□ -0.78
SCN8A-207ENST00000551216 Q8NAQ8 132 aa10.19□□□□□ -0.78
SCN8A-207ENST00000551216 VWFP04275 2813 aa10.19□□□□□ -0.78
SCN8A-207ENST00000551216 IGHV4-28A0A0C4DH34 117 aa10.18□□□□□ -0.78
SCN8A-207ENST00000551216 LOC100131303A0A0U1RQF7 123 aa10.18□□□□□ -0.78
SCN8A-207ENST00000551216 SPART-AS1P0CW21 52 aa10.18□□□□□ -0.78
SCN8A-207ENST00000551216 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
SCN8A-207ENST00000551216 TRAV26-1A0A087WT03 109 aa10.17□□□□□ -0.78
SCN8A-207ENST00000551216 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
SCN8A-207ENST00000551216 GYPEP15421 78 aa10.17□□□□□ -0.78
SCN8A-207ENST00000551216 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
SCN8A-207ENST00000551216 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
SCN8A-207ENST00000551216 Q6ZVH6 145 aa10.17□□□□□ -0.78
SCN8A-207ENST00000551216 ATP5G1P05496 136 aa10.16□□□□□ -0.78
SCN8A-207ENST00000551216 DAD1P61803 113 aa10.16□□□□□ -0.78
SCN8A-207ENST00000551216 ZFAND6Q6FIF0 208 aa10.16□□□□□ -0.78
SCN8A-207ENST00000551216 GTF2H5Q6ZYL4 71 aa10.16□□□□□ -0.78
SCN8A-207ENST00000551216 SH2D6Q7Z4S9 175 aa10.16□□□□□ -0.78
SCN8A-207ENST00000551216 NHP2Q9NX24 153 aaKnown RBP10.16□□□□□ -0.78
SCN8A-207ENST00000551216 A0A1B0GUV1 79 aa10.15□□□□□ -0.78
SCN8A-207ENST00000551216 PAX4O43316 350 aa10.15□□□□□ -0.78
SCN8A-207ENST00000551216 C12orf74Q32Q52 190 aa10.15□□□□□ -0.78
SCN8A-207ENST00000551216 CDKN2A-AS1Q9UH64 79 aa10.15□□□□□ -0.78
SCN8A-207ENST00000551216 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.79
SCN8A-207ENST00000551216 CYSRT1A8MQ03 144 aa10.14□□□□□ -0.79
SCN8A-207ENST00000551216 TIMM17BO60830 172 aa10.14□□□□□ -0.79
SCN8A-207ENST00000551216 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
SCN8A-207ENST00000551216 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
SCN8A-207ENST00000551216 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
SCN8A-207ENST00000551216 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
SCN8A-207ENST00000551216 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 A0A1W2PPM0 123 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 H3BUT2 72 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 K7EP13 123 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 CCL25O15444 150 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 FABP2P12104 132 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 OXLD1Q5BKU9 147 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 SAMD5Q5TGI4 173 aa10.13□□□□□ -0.79
SCN8A-207ENST00000551216 MAST4O15021 2626 aa10.12□□□□□ -0.79
SCN8A-207ENST00000551216 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
SCN8A-207ENST00000551216 NDUFA1O15239 70 aa10.12□□□□□ -0.79
SCN8A-207ENST00000551216 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
SCN8A-207ENST00000551216 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 GAGE10A6NGK3 116 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 SPINK8P0C7L1 97 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 RPL24P83731 157 aaKnown RBP10.11□□□□□ -0.79
SCN8A-207ENST00000551216 PRIMA1Q86XR5 153 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 RAB37Q96AX2 223 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 COX6A2Q02221 97 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 GAGE6Q13070 117 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 SPANXDQ9BXN6 97 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
SCN8A-207ENST00000551216 IGLL5B9A064 214 aa10.1□□□□□ -0.79
SCN8A-207ENST00000551216 K7EP34 96 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms