RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 XAF1Q6GPH4 301 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 ZCCHC23Q6ZST2 131 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 LINC00643Q86TS7 51 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 ARL17AQ8IVW1 177 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 FAM213BQ8TBF2 198 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 C4orf3Q8WVX3 66 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 NXT2Q9NPJ8 142 aaKnown RBP1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 AFDNP55196 1824 aaKnown RBP1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 LRP5O75197 1615 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 EDC4Q6P2E9 1401 aaKnown RBP1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 SPTBP11277 2137 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 DLG5Q8TDM6 1919 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 URB2Q14146 1524 aaKnown RBP1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 PDCD11Q14690 1871 aaKnown RBP1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 SHANK2Q9UPX8 1470 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 ABCA6Q8N139 1617 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 TRAV23DV6A0A075B6W5 121 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 A0A087WXM4 84 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 A0A0J9YY99 117 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 ANGP03950 147 aaKnown RBP1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 RNASE3P12724 160 aaKnown RBP1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 SPATA45Q537H7 98 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 PSMG4Q5JS54 123 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 C1orf137Q5JT78 98 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 RPL7L1Q6DKI1 246 aaKnown RBP1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 CYP2G1PQ6ZSU1 146 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 LIMD2Q9BT23 127 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 HIGD1BQ9P298 99 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 COL4A5P29400 1685 aa1.2□□□□□ -2.22
TSPAN8-205ENST00000550818 TET1Q8NFU7 2136 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 ABCA4P78363 2273 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 MADDQ8WXG6 1647 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 UNC13CQ8NB66 2214 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 TRBV25-1A0A075B6N4 114 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 TRBV10-1A0A0K0K1A3 114 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 LOC101927531A0A1B0GV80 90 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 C7orf77A4D0Y5 90 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 CRYM-AS1A6NIL9 109 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 H3BUT2 72 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 IGHV3-30P01768 117 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 COX6CP09669 75 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 IGHV3-30-5P0DP03 117 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 ITSN1Q15811 1721 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 DEFB113Q30KQ7 82 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 TMEM170BQ5T4T1 132 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 Q86TA4 180 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 CLECL1Q8IZS7 167 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 Q8TAT8 98 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 DMAC1Q96GE9 116 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 PRO1854Q9UHT4 67 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 CDK13Q14004 1512 aaKnown RBP1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 A0A1B0GUL6 1792 aa1.19□□□□□ -2.22
TSPAN8-205ENST00000550818 MYO7BQ6PIF6 2116 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 TRAV22A0A0B4J277 110 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 TMEM30CPA0ZSE6 113 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 TMEM14DPA8MWL7 114 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 UMAD1C9J7I0 102 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 HCRTO43612 131 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 SMIM13P0DJ93 91 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 UBE2D1P51668 147 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 EFNA4P52798 201 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 S100A7L2Q5SY68 101 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 Q5VV11 94 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 AMELXQ99217 191 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 DYNLRB1Q9NP97 96 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 CDC42SE2Q9NRR3 84 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 MYOM1P52179 1685 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 CFAP43Q8NDM7 1665 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 ALPK2Q86TB3 2170 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 RAPGEF6Q8TEU7 1601 aa1.18□□□□□ -2.22
TSPAN8-205ENST00000550818 PLXNC1O60486 1568 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 LAMA4Q16363 1823 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 CLASP1Q7Z460 1538 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 TRBV6-8A0A0A6YYG3 113 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 TRAV12-3A0A0B4J271 114 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 LOC285095A0A1B0GVY8 99 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 HIGD1CA8MV81 97 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 ELOF1P60002 83 aaKnown RBP1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 DEFB132Q7Z7B7 95 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 Q8N6K4 173 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 SPTSSBQ8NFR3 76 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 IFI27L1Q96BM0 104 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 KLK9Q9UKQ9 250 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 LRRC37A3O60309 1634 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 RNF17Q9BXT8 1623 aaKnown RBP1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 SIP14410 1827 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 CEP192Q8TEP8 1941 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 MAST1Q9Y2H9 1570 aa1.17□□□□□ -2.22
TSPAN8-205ENST00000550818 NEXMIFQ5QGS0 1516 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 IGLV3-32A0A0A0MS00 114 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 NUPR2A6NF83 97 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 HMGN2P05204 90 aaKnown RBP1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 IL9P15248 144 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 KRTAP10-4P60372 401 aaPredicted RBP1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 PATE1Q8WXA2 126 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 BPESC1Q9GZL8 116 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 ORMDL1Q9P0S3 153 aa1.16□□□□□ -2.22
TSPAN8-205ENST00000550818 LENEPQ9Y5L5 61 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms