RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 C2orf91Q6ZV80 131 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 PTH2Q96A98 100 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 VSIG2Q96IQ7 327 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 SLC25A29Q8N8R3 303 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 ODF3Q96PU9 254 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
CUX1-214ENST00000550008 CFAP126Q5VTH2 177 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 A0A096LNJ9 63 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 GAGE2AQ6NT46 116 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 CARD19Q96LW7 228 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 LOC400499M0QZD8 3231 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 IGHV3-30P01768 117 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 IGHV3-33P01772 117 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 IGHV3-30-5P0DP03 117 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 C15orf53Q8NAA6 179 aa11.06□□□□□ -0.64
CUX1-214ENST00000550008 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
CUX1-214ENST00000550008 UBE2DNLQ8IWF7 75 aa11.05□□□□□ -0.64
CUX1-214ENST00000550008 HIST1H4AP62805 103 aaKnown RBP11.05□□□□□ -0.64
CUX1-214ENST00000550008 LY6G6DO95868 133 aa11.04□□□□□ -0.64
CUX1-214ENST00000550008 ATP5G1P05496 136 aa11.04□□□□□ -0.64
CUX1-214ENST00000550008 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
CUX1-214ENST00000550008 TNRC18O15417 2968 aaPredicted RBP11.03□□□□□ -0.64
CUX1-214ENST00000550008 POLR2KP53803 58 aaKnown RBP11.03□□□□□ -0.64
CUX1-214ENST00000550008 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
CUX1-214ENST00000550008 TRBV27A0A0K0K1C4 114 aa11.03□□□□□ -0.64
CUX1-214ENST00000550008 SPART-AS1P0CW21 52 aa11.03□□□□□ -0.64
CUX1-214ENST00000550008 HERV-K104P63124 156 aa11.03□□□□□ -0.64
CUX1-214ENST00000550008 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
CUX1-214ENST00000550008 IGHV1-58A0A0C4DH39 117 aa11.02□□□□□ -0.64
CUX1-214ENST00000550008 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.64
CUX1-214ENST00000550008 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
CUX1-214ENST00000550008 CRIP2P52943 208 aaPredicted RBP11.02□□□□□ -0.65
CUX1-214ENST00000550008 RNF183Q96D59 192 aa11.02□□□□□ -0.65
CUX1-214ENST00000550008 RS1O15537 224 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 MAST4O15021 2626 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 DMXL1Q9Y485 3027 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 IGHV4-4A0A075B6R2 117 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 SOCS3O14543 225 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 KALRNO60229 2985 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 TSHBP01222 138 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 FOXI1Q12951 378 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 SND1-IT1Q9HBX3 110 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
CUX1-214ENST00000550008 COL12A1Q99715 3063 aa11□□□□□ -0.65
CUX1-214ENST00000550008 COL27A1Q8IZC6 1860 aaPredicted RBP11□□□□□ -0.65
CUX1-214ENST00000550008 IGKV2D-24A0A075B6R9 120 aa11□□□□□ -0.65
CUX1-214ENST00000550008 PSCAO43653 123 aa11□□□□□ -0.65
CUX1-214ENST00000550008 CLEC2BQ92478 149 aa11□□□□□ -0.65
CUX1-214ENST00000550008 USP34Q70CQ2 3546 aa11□□□□□ -0.65
CUX1-214ENST00000550008 NFE4Q86UQ8 179 aa11□□□□□ -0.65
CUX1-214ENST00000550008 A0A0J9YXY3 114 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 PLA2G2AP14555 144 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 COX7B2Q8TF08 81 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
CUX1-214ENST00000550008 NDUFA11Q86Y39 141 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 PRO0255Q9UI72 69 aa10.99□□□□□ -0.65
CUX1-214ENST00000550008 TEN1Q86WV5 123 aa10.98□□□□□ -0.65
CUX1-214ENST00000550008 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
CUX1-214ENST00000550008 FAM110AQ9BQ89 295 aa10.98□□□□□ -0.65
CUX1-214ENST00000550008 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
CUX1-214ENST00000550008 FLNCQ14315 2725 aa10.97□□□□□ -0.65
CUX1-214ENST00000550008 TEP1Q99973 2627 aaKnown RBP10.97□□□□□ -0.65
CUX1-214ENST00000550008 NDUFA7O95182 113 aa10.97□□□□□ -0.65
CUX1-214ENST00000550008 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
CUX1-214ENST00000550008 COX7A2LO14548 114 aa10.96□□□□□ -0.65
CUX1-214ENST00000550008 TRBV6-5A0A0K0K1A5 114 aa10.96□□□□□ -0.66
CUX1-214ENST00000550008 COX8CQ7Z4L0 72 aa10.96□□□□□ -0.66
CUX1-214ENST00000550008 TM2D2Q9BX73 214 aa10.96□□□□□ -0.66
CUX1-214ENST00000550008 LINC01620Q4KN68 170 aa10.95□□□□□ -0.66
CUX1-214ENST00000550008 HILS1P60008 231 aa10.95□□□□□ -0.66
CUX1-214ENST00000550008 CHD6Q8TD26 2715 aa10.95□□□□□ -0.66
CUX1-214ENST00000550008 ANKRD29Q8N6D5 301 aa10.95□□□□□ -0.66
CUX1-214ENST00000550008 TMEM223A0PJW6 202 aa10.94□□□□□ -0.66
CUX1-214ENST00000550008 MT-ATP8P03928 68 aa10.94□□□□□ -0.66
CUX1-214ENST00000550008 LINC00269Q8N2A0 174 aa10.94□□□□□ -0.66
CUX1-214ENST00000550008 TCL1BO95988 128 aa10.93□□□□□ -0.66
CUX1-214ENST00000550008 BAALC-AS2P0C853 105 aa10.93□□□□□ -0.66
CUX1-214ENST00000550008 TRACP01848 142 aa10.93□□□□□ -0.66
CUX1-214ENST00000550008 IGIPA6NJ69 53 aa10.92□□□□□ -0.66
CUX1-214ENST00000550008 PIK3CD-AS1Q5SR53 167 aa10.92□□□□□ -0.66
CUX1-214ENST00000550008 ZNF580Q9UK33 172 aa10.92□□□□□ -0.66
CUX1-214ENST00000550008 ZMAT4Q9H898 229 aa10.92□□□□□ -0.66
CUX1-214ENST00000550008 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
CUX1-214ENST00000550008 TACC2O95359 2948 aa10.91□□□□□ -0.66
CUX1-214ENST00000550008 INSL3P51460 131 aa10.91□□□□□ -0.66
CUX1-214ENST00000550008 IGSF10Q6WRI0 2623 aa10.91□□□□□ -0.66
CUX1-214ENST00000550008 IGLV2-18A0A075B6J9 118 aa10.91□□□□□ -0.66
CUX1-214ENST00000550008 SPANXB1Q9NS25 103 aaPredicted RBP10.91□□□□□ -0.66
CUX1-214ENST00000550008 Q6ZSN1 163 aa10.9□□□□□ -0.66
CUX1-214ENST00000550008 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
CUX1-214ENST00000550008 CAMK2N2Q96S95 79 aa10.9□□□□□ -0.66
CUX1-214ENST00000550008 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.67
CUX1-214ENST00000550008 MIAQ16674 131 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 272.1 ms