RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 F2Z2F3 143 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 CHKB-CPT1BH3BT56 60 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 K7EIL1 84 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 HMGN4O00479 90 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 APOC3P02656 99 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 TRAPPC2P0DI81 140 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 TRAPPC2BP0DI82 140 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 RPL37P61927 97 aaKnown RBP0.82□□□□□ -2.28
CCDC38-208ENST00000549876 TMEM170BQ5T4T1 132 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 VMO1Q7Z5L0 202 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 SERP2Q8N6R1 65 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 FAM213BQ8TBF2 198 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 SMIM4Q8WVI0 70 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 PLAC4Q8WY50 150 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 BPESC1Q9GZL8 116 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 CDC42SE2Q9NRR3 84 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 FAIMQ9NVQ4 179 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 ROS1P08922 2347 aa0.82□□□□□ -2.28
CCDC38-208ENST00000549876 EPRSP07814 1512 aaKnown RBP0.81□□□□□ -2.28
CCDC38-208ENST00000549876 CDK13Q14004 1512 aaKnown RBP0.81□□□□□ -2.28
CCDC38-208ENST00000549876 TMEM14DPA8MWL7 114 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 M0R135 149 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 UQCR11O14957 56 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 COX17Q14061 63 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 C9orf62Q8N4C0 152 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 SMIM11BQ8TCY0 68 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 Q96NJ1 140 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 CACFD1Q9UGQ2 172 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 TOP2BQ02880 1626 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 IFT172Q9UG01 1749 aa0.81□□□□□ -2.28
CCDC38-208ENST00000549876 FANCAO15360 1455 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 MED14O60244 1454 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 CCDC18Q5T9S5 1454 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 PLEKHH2Q8IVE3 1493 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 MLH3Q9UHC1 1453 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 EHBP1L1Q8N3D4 1523 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 TRGV1A0A0A0MS02 117 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 IGLC7A0M8Q6 106 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 F8VRH5 84 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 PIN1P1O15428 100 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 SAA2P0DJI9 122 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-208ENST00000549876 ACYP2P14621 99 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 PYY3Q5JQD4 70 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 BAGE2Q86Y30 109 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 LCN9Q8WX39 176 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 KDM5AP29375 1690 aaKnown RBP0.8□□□□□ -2.28
CCDC38-208ENST00000549876 CLTCQ00610 1675 aaKnown RBP0.8□□□□□ -2.28
CCDC38-208ENST00000549876 RGPD4Q7Z3J3 1758 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 LAMA4Q16363 1823 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 IQSEC2Q5JU85 1478 aa0.8□□□□□ -2.28
CCDC38-208ENST00000549876 RAPGEF6Q8TEU7 1601 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 KIF21AQ7Z4S6 1674 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 LRRC37A2A6NM11 1700 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 ABCA1O95477 2261 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 PPLO60437 1756 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 UQCRHLA0A096LP55 91 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 TRAV1-2A0A0B4J238 106 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 CTXND1A0A1B0GTU2 59 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 H7BZZ5 65 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 BCE1O60756 84 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 FAUP35544 74 aaKnown RBP0.79□□□□□ -2.28
CCDC38-208ENST00000549876 NPVFQ9HCQ7 196 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 NXT2Q9NPJ8 142 aaKnown RBP0.79□□□□□ -2.28
CCDC38-208ENST00000549876 PDCD11Q14690 1871 aaKnown RBP0.79□□□□□ -2.28
CCDC38-208ENST00000549876 HMGXB3Q12766 1538 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 ABCC2Q92887 1545 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 UNC13BO14795 1591 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 ARHGEF5Q12774 1597 aa0.79□□□□□ -2.28
CCDC38-208ENST00000549876 COL4A6Q14031 1691 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 TRBV25-1A0A075B6N4 114 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 GVQW2A0A096LPI5 108 aaPredicted RBP0.78□□□□□ -2.28
CCDC38-208ENST00000549876 SYS1-DBNDD2H3BUS1 97 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 LY6G6CO95867 125 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 UQCRHP07919 91 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 MGPP08493 103 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 SPINT3P49223 89 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 SMIM11AP58511 58 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 PMCHL1Q16048 86 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 CFAP126Q5VTH2 177 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 RABAC1Q9UI14 185 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 CEP162Q5TB80 1403 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 ATP10BO94823 1461 aa0.78□□□□□ -2.28
CCDC38-208ENST00000549876 RGPD3A6NKT7 1758 aaPredicted RBP0.78□□□□□ -2.29
CCDC38-208ENST00000549876 A0A0G2JND7 137 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 K7EP34 96 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 ZNF137PP52743 207 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 SPINK9Q5DT21 86 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 Q6ZRX8 168 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 PRR15LQ9BU68 103 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 PROK2Q9HC23 129 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 PLIN4Q96Q06 1357 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 UACAQ9BZF9 1416 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 ZMYM4Q5VZL5 1548 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 F5P12259 2224 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 KNTC1P50748 2209 aa0.77□□□□□ -2.29
CCDC38-208ENST00000549876 BTAF1O14981 1849 aa0.76□□□□□ -2.29
CCDC38-208ENST00000549876 MON2Q7Z3U7 1717 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms