RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 ZNF236Q9UL36 1845 aa1.63□□□□□ -2.15
PRIM1-204ENST00000549549 LRRC37A2A6NM11 1700 aa1.63□□□□□ -2.15
PRIM1-204ENST00000549549 TMEM170BQ5T4T1 132 aa1.62□□□□□ -2.15
PRIM1-204ENST00000549549 LINC00472Q9H8W2 130 aa1.62□□□□□ -2.15
PRIM1-204ENST00000549549 SHANK2Q9UPX8 1470 aa1.62□□□□□ -2.15
PRIM1-204ENST00000549549 NAV3Q8IVL0 2385 aa1.62□□□□□ -2.15
PRIM1-204ENST00000549549 DIP2CQ9Y2E4 1556 aa1.61□□□□□ -2.15
PRIM1-204ENST00000549549 APOC3P02656 99 aa1.61□□□□□ -2.15
PRIM1-204ENST00000549549 NPVFQ9HCQ7 196 aa1.61□□□□□ -2.15
PRIM1-204ENST00000549549 MANBALQ9NQG1 85 aa1.6□□□□□ -2.15
PRIM1-204ENST00000549549 HMGXB3Q12766 1538 aa1.6□□□□□ -2.15
PRIM1-204ENST00000549549 EHBP1L1Q8N3D4 1523 aa1.6□□□□□ -2.15
PRIM1-204ENST00000549549 SFT2D2O95562 160 aa1.59□□□□□ -2.15
PRIM1-204ENST00000549549 PRH1P02810 166 aa1.59□□□□□ -2.15
PRIM1-204ENST00000549549 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.16
PRIM1-204ENST00000549549 CHD1O14646 1710 aa1.58□□□□□ -2.16
PRIM1-204ENST00000549549 S100A10P60903 97 aa1.58□□□□□ -2.16
PRIM1-204ENST00000549549 KRTDAPP60985 99 aa1.58□□□□□ -2.16
PRIM1-204ENST00000549549 PRO1854Q9UHT4 67 aa1.58□□□□□ -2.16
PRIM1-204ENST00000549549 KDM5AP29375 1690 aaKnown RBP1.58□□□□□ -2.16
PRIM1-204ENST00000549549 ABCA3Q99758 1704 aa1.57□□□□□ -2.16
PRIM1-204ENST00000549549 SSBP3-AS1Q7Z2R9 100 aa1.57□□□□□ -2.16
PRIM1-204ENST00000549549 hADV29S1A0JD25 119 aa1.56□□□□□ -2.16
PRIM1-204ENST00000549549 COX6A2Q02221 97 aa1.56□□□□□ -2.16
PRIM1-204ENST00000549549 CRYM-AS1A6NIL9 109 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 ZNF815PA8K554 130 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 COX6CP09669 75 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 NXT2Q9NPJ8 142 aaKnown RBP1.55□□□□□ -2.16
PRIM1-204ENST00000549549 TCHHQ07283 1943 aa1.55□□□□□ -2.16
PRIM1-204ENST00000549549 TOP2BQ02880 1626 aa1.54□□□□□ -2.16
PRIM1-204ENST00000549549 KDM3BQ7LBC6 1761 aa1.52□□□□□ -2.17
PRIM1-204ENST00000549549 CADP27708 2225 aa1.51□□□□□ -2.17
PRIM1-204ENST00000549549 MPC2O95563 127 aa1.51□□□□□ -2.17
PRIM1-204ENST00000549549 S100A8P05109 93 aa1.51□□□□□ -2.17
PRIM1-204ENST00000549549 FAM223AQ8IWN6 122 aa1.51□□□□□ -2.17
PRIM1-204ENST00000549549 RAPGEF6Q8TEU7 1601 aa1.51□□□□□ -2.17
PRIM1-204ENST00000549549 SEC11AP67812 179 aa1.5□□□□□ -2.17
PRIM1-204ENST00000549549 NCMAPQ5T1S8 102 aa1.5□□□□□ -2.17
PRIM1-204ENST00000549549 SMR3AQ99954 134 aa1.5□□□□□ -2.17
PRIM1-204ENST00000549549 ARL2-SNX15V9GYD0 113 aa1.5□□□□□ -2.17
PRIM1-204ENST00000549549 SBF2Q86WG5 1849 aa1.5□□□□□ -2.17
PRIM1-204ENST00000549549 CCNB3Q8WWL7 1395 aa1.49□□□□□ -2.17
PRIM1-204ENST00000549549 LRP6O75581 1613 aa1.49□□□□□ -2.17
PRIM1-204ENST00000549549 M0R143 59 aa1.49□□□□□ -2.17
PRIM1-204ENST00000549549 MT-ATP8P03928 68 aa1.49□□□□□ -2.17
PRIM1-204ENST00000549549 IGLC1P0CG04 106 aa1.49□□□□□ -2.17
PRIM1-204ENST00000549549 TEX14Q8IWB6 1497 aa1.49□□□□□ -2.17
PRIM1-204ENST00000549549 MGPP08493 103 aa1.48□□□□□ -2.17
PRIM1-204ENST00000549549 GAPVD1Q14C86 1478 aa1.48□□□□□ -2.17
PRIM1-204ENST00000549549 PRDM15P57071 1507 aaPredicted RBP1.47□□□□□ -2.17
PRIM1-204ENST00000549549 HAMPP81172 84 aa1.47□□□□□ -2.17
PRIM1-204ENST00000549549 SPRR4Q96PI1 79 aa1.47□□□□□ -2.17
PRIM1-204ENST00000549549 ABCC10Q5T3U5 1492 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 FYCO1Q9BQS8 1478 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 C10orf142B7Z368 130 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 GNGT2O14610 69 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 TRAPPC2P0DI81 140 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 TRAPPC2BP0DI82 140 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 MYO7AQ13402 2215 aa1.46□□□□□ -2.18
PRIM1-204ENST00000549549 Q6JHZ5 121 aa1.45□□□□□ -2.18
PRIM1-204ENST00000549549 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
PRIM1-204ENST00000549549 FAIMQ9NVQ4 179 aa1.45□□□□□ -2.18
PRIM1-204ENST00000549549 WNK3Q9BYP7 1800 aa1.45□□□□□ -2.18
PRIM1-204ENST00000549549 LAMC1P11047 1609 aa1.44□□□□□ -2.18
PRIM1-204ENST00000549549 AP4S1Q9Y587 144 aa1.44□□□□□ -2.18
PRIM1-204ENST00000549549 APCP25054 2843 aa1.44□□□□□ -2.18
PRIM1-204ENST00000549549 SCN7AQ01118 1682 aa1.44□□□□□ -2.18
PRIM1-204ENST00000549549 COL4A6Q14031 1691 aa1.44□□□□□ -2.18
PRIM1-204ENST00000549549 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
PRIM1-204ENST00000549549 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
PRIM1-204ENST00000549549 CNFNQ9BYD5 112 aa1.43□□□□□ -2.18
PRIM1-204ENST00000549549 CACNA1HO95180 2353 aa1.43□□□□□ -2.18
PRIM1-204ENST00000549549 SPINK6Q6UWN8 80 aa1.42□□□□□ -2.18
PRIM1-204ENST00000549549 PLXNB2O15031 1838 aa1.42□□□□□ -2.18
PRIM1-204ENST00000549549 ADGRL2O95490 1459 aa1.42□□□□□ -2.18
PRIM1-204ENST00000549549 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
PRIM1-204ENST00000549549 A0A0D9SFI3 127 aa1.41□□□□□ -2.18
PRIM1-204ENST00000549549 NSD3Q9BZ95 1437 aa1.4□□□□□ -2.18
PRIM1-204ENST00000549549 TTC28Q96AY4 2481 aa1.4□□□□□ -2.19
PRIM1-204ENST00000549549 ANKRD36BQ8N2N9 1353 aa1.4□□□□□ -2.19
PRIM1-204ENST00000549549 DPY30Q9C005 99 aa1.4□□□□□ -2.19
PRIM1-204ENST00000549549 FAM223BA6NKX1 122 aa1.39□□□□□ -2.19
PRIM1-204ENST00000549549 NDUFC1O43677 76 aa1.39□□□□□ -2.19
PRIM1-204ENST00000549549 LINC00032P0C843 101 aa1.39□□□□□ -2.19
PRIM1-204ENST00000549549 SAA2P0DJI9 122 aaPredicted RBP1.38□□□□□ -2.19
PRIM1-204ENST00000549549 ERCC6L2Q5T890 1561 aa1.38□□□□□ -2.19
PRIM1-204ENST00000549549 M0R3E3 92 aa1.37□□□□□ -2.19
PRIM1-204ENST00000549549 TMEM263Q8WUH6 116 aaKnown RBP1.37□□□□□ -2.19
PRIM1-204ENST00000549549 PMCHL2Q9BQD1 86 aa1.37□□□□□ -2.19
PRIM1-204ENST00000549549 BDP1A6H8Y1 2624 aa1.36□□□□□ -2.19
PRIM1-204ENST00000549549 BCE1O60756 84 aa1.36□□□□□ -2.19
PRIM1-204ENST00000549549 PKIAP61925 76 aa1.36□□□□□ -2.19
PRIM1-204ENST00000549549 BTAF1O14981 1849 aa1.36□□□□□ -2.19
PRIM1-204ENST00000549549 ASXL3Q9C0F0 2248 aa1.35□□□□□ -2.19
PRIM1-204ENST00000549549 MAGI1Q96QZ7 1491 aaPredicted RBP1.34□□□□□ -2.19
PRIM1-204ENST00000549549 MLH3Q9UHC1 1453 aa1.34□□□□□ -2.19
PRIM1-204ENST00000549549 COL5A1-AS1Q5SY13 56 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms