RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
LETMD1-209ENST00000547318 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
LETMD1-209ENST00000547318 BBC3Q96PG8 261 aaPredicted RBP10.46□□□□□ -0.73
LETMD1-209ENST00000547318 TRBV6-4A0A1B0GX49 114 aa10.45□□□□□ -0.74
LETMD1-209ENST00000547318 CDC42SE2Q9NRR3 84 aa10.45□□□□□ -0.74
LETMD1-209ENST00000547318 SMIM1B2RUZ4 78 aa10.45□□□□□ -0.74
LETMD1-209ENST00000547318 LST1O00453 97 aa10.45□□□□□ -0.74
LETMD1-209ENST00000547318 OVOL2Q9BRP0 275 aa10.45□□□□□ -0.74
LETMD1-209ENST00000547318 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
LETMD1-209ENST00000547318 SVEP1Q4LDE5 3571 aa10.44□□□□□ -0.74
LETMD1-209ENST00000547318 UBE2L6O14933 153 aa10.44□□□□□ -0.74
LETMD1-209ENST00000547318 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
LETMD1-209ENST00000547318 UBE2WQ96B02 151 aa10.44□□□□□ -0.74
LETMD1-209ENST00000547318 Q9H8V8 135 aa10.44□□□□□ -0.74
LETMD1-209ENST00000547318 ANKRD17O75179 2603 aaKnown RBP10.44□□□□□ -0.74
LETMD1-209ENST00000547318 XGP55808 180 aa10.43□□□□□ -0.74
LETMD1-209ENST00000547318 Q6ZTI0 123 aa10.43□□□□□ -0.74
LETMD1-209ENST00000547318 LINC00308Q8TCZ7 52 aa10.43□□□□□ -0.74
LETMD1-209ENST00000547318 NTN5Q8WTR8 489 aaPredicted RBP10.43□□□□□ -0.74
LETMD1-209ENST00000547318 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
LETMD1-209ENST00000547318 C2orf82Q6UX34 121 aa10.43□□□□□ -0.74
LETMD1-209ENST00000547318 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
LETMD1-209ENST00000547318 USP9XQ93008 2570 aaPredicted RBP10.43□□□□□ -0.74
LETMD1-209ENST00000547318 SPG11Q96JI7 2443 aa10.42□□□□□ -0.74
LETMD1-209ENST00000547318 COX6A2Q02221 97 aa10.42□□□□□ -0.74
LETMD1-209ENST00000547318 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.42□□□□□ -0.74
LETMD1-209ENST00000547318 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
LETMD1-209ENST00000547318 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
LETMD1-209ENST00000547318 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 A8MZ25 164 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 IGLV1-51P01701 117 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 PF4P02776 101 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 CKS1BP61024 79 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 CFAP46Q8IYW2 2715 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 PIEZO1Q92508 2521 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 F5H768 121 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 LINC00694P0DN24 101 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 DEFB121Q5J5C9 76 aa10.41□□□□□ -0.74
LETMD1-209ENST00000547318 CITED2Q99967 270 aaPredicted RBP10.41□□□□□ -0.74
LETMD1-209ENST00000547318 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
LETMD1-209ENST00000547318 IGSF10Q6WRI0 2623 aa10.4□□□□□ -0.74
LETMD1-209ENST00000547318 ZFHX3Q15911 3703 aa10.4□□□□□ -0.74
LETMD1-209ENST00000547318 TRAV8-4A0A0B4J246 113 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 A0A1W2PRX2 142 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE12JA6NER3 117 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE4Q13068 117 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE5Q13069 117 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 FAM222AQ5U5X8 452 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 NOP10Q9NPE3 64 aaKnown RBP10.4□□□□□ -0.75
LETMD1-209ENST00000547318 ESM1Q9NQ30 184 aa10.4□□□□□ -0.75
LETMD1-209ENST00000547318 COX7A2LO14548 114 aa10.39□□□□□ -0.75
LETMD1-209ENST00000547318 Q6Q795 121 aa10.39□□□□□ -0.75
LETMD1-209ENST00000547318 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
LETMD1-209ENST00000547318 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 TRAV13-1A0A0B4J241 112 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 PLAC8L1A1L4L8 177 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
LETMD1-209ENST00000547318 MEIG1Q5JSS6 88 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 SHISA2Q6UWI4 295 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 WFDC11Q8NEX6 87 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 C19orf73Q9NVV2 129 aa10.38□□□□□ -0.75
LETMD1-209ENST00000547318 SNCGO76070 127 aa10.37□□□□□ -0.75
LETMD1-209ENST00000547318 NDUFA7O95182 113 aa10.37□□□□□ -0.75
LETMD1-209ENST00000547318 CITED1Q99966 193 aa10.37□□□□□ -0.75
LETMD1-209ENST00000547318 NPC2P61916 151 aa10.36□□□□□ -0.75
LETMD1-209ENST00000547318 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
LETMD1-209ENST00000547318 TRAV13-2A0A0B4J235 113 aa10.36□□□□□ -0.75
LETMD1-209ENST00000547318 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
LETMD1-209ENST00000547318 TRACP01848 142 aa10.36□□□□□ -0.75
LETMD1-209ENST00000547318 SORL1Q92673 2214 aa10.35□□□□□ -0.75
LETMD1-209ENST00000547318 ACYP1P07311 99 aa10.35□□□□□ -0.75
LETMD1-209ENST00000547318 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
LETMD1-209ENST00000547318 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE7O76087 117 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 CLEC2BQ92478 149 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 DAND5Q8N907 189 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 KIR2DL5BQ8NHK3 375 aa10.34□□□□□ -0.75
LETMD1-209ENST00000547318 UBR5O95071 2799 aaPredicted RBP10.33□□□□□ -0.76
LETMD1-209ENST00000547318 TRBV6-8A0A0A6YYG3 113 aa10.33□□□□□ -0.76
LETMD1-209ENST00000547318 C11orf44Q8N8P7 122 aa10.33□□□□□ -0.76
LETMD1-209ENST00000547318 COX7B2Q8TF08 81 aa10.33□□□□□ -0.76
LETMD1-209ENST00000547318 FLNCQ14315 2725 aa10.33□□□□□ -0.76
LETMD1-209ENST00000547318 VPS13CQ709C8 3753 aa10.33□□□□□ -0.76
LETMD1-209ENST00000547318 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
LETMD1-209ENST00000547318 KRTAP1-1Q07627 177 aa10.32□□□□□ -0.76
LETMD1-209ENST00000547318 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
LETMD1-209ENST00000547318 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
LETMD1-209ENST00000547318 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
LETMD1-209ENST00000547318 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
LETMD1-209ENST00000547318 FBN2P35556 2912 aa10.31□□□□□ -0.76
LETMD1-209ENST00000547318 HILS1P60008 231 aa10.31□□□□□ -0.76
LETMD1-209ENST00000547318 FHL2Q14192 279 aa10.31□□□□□ -0.76
LETMD1-209ENST00000547318 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
LETMD1-209ENST00000547318 HIST2H2BCQ6DN03 193 aa10.31□□□□□ -0.76
LETMD1-209ENST00000547318 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
LETMD1-209ENST00000547318 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms