RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ZNF415Q09FC8 603 aa10.86□□□□□ -0.67
USP28-214ENST00000545540 PPDPFLQ8WWR9 84 aa10.86□□□□□ -0.67
USP28-214ENST00000545540 HELZ2Q9BYK8 2649 aaKnown RBP10.86□□□□□ -0.67
USP28-214ENST00000545540 Q6ZTI0 123 aa10.86□□□□□ -0.67
USP28-214ENST00000545540 FASNP49327 2511 aaKnown RBP10.86□□□□□ -0.67
USP28-214ENST00000545540 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
USP28-214ENST00000545540 DEFB114Q30KQ6 69 aa10.86□□□□□ -0.67
USP28-214ENST00000545540 C11orf72Q8NBR9 251 aa10.86□□□□□ -0.67
USP28-214ENST00000545540 IGHV1-58A0A0C4DH39 117 aa10.85□□□□□ -0.67
USP28-214ENST00000545540 DSCR9P59020 149 aa10.85□□□□□ -0.67
USP28-214ENST00000545540 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
USP28-214ENST00000545540 GAGE12JA6NER3 117 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 GAGE4Q13068 117 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 GAGE5Q13069 117 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 HECTD1Q9ULT8 2610 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 TRBV20-1A0A075B6N2 111 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 LYRM7Q5U5X0 104 aa10.84□□□□□ -0.67
USP28-214ENST00000545540 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
USP28-214ENST00000545540 CIDEAO60543 219 aa10.83□□□□□ -0.68
USP28-214ENST00000545540 RPL35AP18077 110 aaKnown RBP10.83□□□□□ -0.68
USP28-214ENST00000545540 STHQ8IWL8 128 aa10.83□□□□□ -0.68
USP28-214ENST00000545540 WFDC11Q8NEX6 87 aa10.83□□□□□ -0.68
USP28-214ENST00000545540 PEMTQ9UBM1 199 aa10.82□□□□□ -0.68
USP28-214ENST00000545540 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
USP28-214ENST00000545540 C1orf158Q8N1D5 194 aa10.82□□□□□ -0.68
USP28-214ENST00000545540 TMEM101Q96IK0 257 aa10.82□□□□□ -0.68
USP28-214ENST00000545540 Q9H8V8 135 aa10.82□□□□□ -0.68
USP28-214ENST00000545540 NOP10Q9NPE3 64 aaKnown RBP10.82□□□□□ -0.68
USP28-214ENST00000545540 INSP01308 110 aa10.81□□□□□ -0.68
USP28-214ENST00000545540 J3QLI3 93 aa10.81□□□□□ -0.68
USP28-214ENST00000545540 CRLF1O75462 422 aa10.81□□□□□ -0.68
USP28-214ENST00000545540 RPL13AP40429 203 aaKnown RBP10.8□□□□□ -0.68
USP28-214ENST00000545540 CRYBA4P53673 196 aa10.8□□□□□ -0.68
USP28-214ENST00000545540 PYGO1Q9Y3Y4 419 aa10.8□□□□□ -0.68
USP28-214ENST00000545540 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
USP28-214ENST00000545540 A0A0B4J2C4 111 aa10.79□□□□□ -0.68
USP28-214ENST00000545540 NTM-AS1Q6ZSK4 140 aa10.79□□□□□ -0.68
USP28-214ENST00000545540 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.78□□□□□ -0.68
USP28-214ENST00000545540 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 GAGE7O76087 117 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 FSHBP01225 129 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 DEFB113Q30KQ7 82 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 ATP6V0E2Q8NHE4 81 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 CITED2Q99967 270 aaPredicted RBP10.78□□□□□ -0.68
USP28-214ENST00000545540 TRAV26-1A0A087WT03 109 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 ATXN8Q156A1 80 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 C2orf82Q6UX34 121 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 C4orf3Q8WVX3 66 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 ESM1Q9NQ30 184 aa10.78□□□□□ -0.68
USP28-214ENST00000545540 MIAQ16674 131 aa10.77□□□□□ -0.68
USP28-214ENST00000545540 LINC00242Q5T6M2 205 aa10.77□□□□□ -0.68
USP28-214ENST00000545540 A0A1B0GV72 72 aa10.77□□□□□ -0.69
USP28-214ENST00000545540 PIK3CD-AS1Q5SR53 167 aa10.77□□□□□ -0.69
USP28-214ENST00000545540 Q8N2B8 174 aa10.77□□□□□ -0.69
USP28-214ENST00000545540 SPANXA1Q9NS26 97 aa10.77□□□□□ -0.69
USP28-214ENST00000545540 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.69
USP28-214ENST00000545540 TRAV4A0A0B4J268 109 aa10.76□□□□□ -0.69
USP28-214ENST00000545540 MEIG1Q5JSS6 88 aa10.76□□□□□ -0.69
USP28-214ENST00000545540 SBSPONQ8IVN8 264 aa10.76□□□□□ -0.69
USP28-214ENST00000545540 CLUHP3Q96NS8 147 aa10.76□□□□□ -0.69
USP28-214ENST00000545540 H7C423 109 aa10.76□□□□□ -0.69
USP28-214ENST00000545540 CCL24O00175 119 aa10.76□□□□□ -0.69
USP28-214ENST00000545540 RNF152Q8N8N0 203 aa10.75□□□□□ -0.69
USP28-214ENST00000545540 DNAJC9-AS1A6NH13 148 aa10.75□□□□□ -0.69
USP28-214ENST00000545540 RNF183Q96D59 192 aa10.75□□□□□ -0.69
USP28-214ENST00000545540 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
USP28-214ENST00000545540 RS1O15537 224 aa10.74□□□□□ -0.69
USP28-214ENST00000545540 ZFAND6Q6FIF0 208 aa10.74□□□□□ -0.69
USP28-214ENST00000545540 SOSTDC1Q6X4U4 206 aa10.74□□□□□ -0.69
USP28-214ENST00000545540 PRIMA1Q86XR5 153 aa10.74□□□□□ -0.69
USP28-214ENST00000545540 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
USP28-214ENST00000545540 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
USP28-214ENST00000545540 ZNF843Q8N446 348 aa10.74□□□□□ -0.69
USP28-214ENST00000545540 SCGB1A1P11684 91 aa10.72□□□□□ -0.69
USP28-214ENST00000545540 GAGE6Q13070 117 aa10.72□□□□□ -0.69
USP28-214ENST00000545540 TENM1Q9UKZ4 2725 aa10.72□□□□□ -0.69
USP28-214ENST00000545540 TRBV30A0A0K0K1B3 111 aa10.72□□□□□ -0.69
USP28-214ENST00000545540 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
USP28-214ENST00000545540 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
USP28-214ENST00000545540 UNC79Q9P2D8 2635 aa10.72□□□□□ -0.69
USP28-214ENST00000545540 A0A096LPF7 62 aa10.71□□□□□ -0.69
USP28-214ENST00000545540 BEAN1Q3B7T3 259 aa10.71□□□□□ -0.69
USP28-214ENST00000545540 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
USP28-214ENST00000545540 ATRQ13535 2644 aa10.71□□□□□ -0.7
USP28-214ENST00000545540 TRBV10-2A0A0K0K1G8 114 aa10.71□□□□□ -0.7
USP28-214ENST00000545540 SMIM1B2RUZ4 78 aa10.71□□□□□ -0.7
USP28-214ENST00000545540 COX6CP09669 75 aa10.71□□□□□ -0.7
USP28-214ENST00000545540 KRTAP1-3Q8IUG1 177 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 UBE2WQ96B02 151 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 SPANXCQ9NY87 97 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 A8MTW9 85 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 K7EQD1 137 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 PDZD2O15018 2839 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
USP28-214ENST00000545540 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms