RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 OR5A1Q8NGJ0 315 aa8.52□□□□□ -1.05
LMO3-231ENST00000544754 TMEM141Q96I45 108 aa8.52□□□□□ -1.05
LMO3-231ENST00000544754 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
LMO3-231ENST00000544754 DNAH7Q8WXX0 4024 aa8.52□□□□□ -1.05
LMO3-231ENST00000544754 CSMD3Q7Z407 3707 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 NPSP0C0P6 89 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 PKIAP61925 76 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 MRPS36P82909 103 aaKnown RBP8.51□□□□□ -1.05
LMO3-231ENST00000544754 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
LMO3-231ENST00000544754 CASC10Q5T4H9 136 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 Q6ZN92 141 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 UPK3BQ9BT76 320 aa8.51□□□□□ -1.05
LMO3-231ENST00000544754 A0A087WX48 190 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 C3orf84H3BNL1 204 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 KRTDAPP60985 99 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 UBE2DNLQ8IWF7 75 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 MAP1LC3CQ9BXW4 147 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
LMO3-231ENST00000544754 SIVA1O15304 175 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 IGHV3-30-3P0DP02 117 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 AMELXQ99217 191 aa8.49□□□□□ -1.05
LMO3-231ENST00000544754 LOC105371267A0A1B0GV96 52 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 H0Y8G0 127 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 PRSS1P07477 247 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 DNAH10OSP0CZ25 163 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 SPATA12Q7Z6I5 190 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 VCX2Q9H322 139 aa8.48□□□□□ -1.05
LMO3-231ENST00000544754 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
LMO3-231ENST00000544754 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
LMO3-231ENST00000544754 PMVKQ15126 192 aa8.47□□□□□ -1.05
LMO3-231ENST00000544754 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
LMO3-231ENST00000544754 DYNC2H1Q8NCM8 4307 aaKnown RBP8.47□□□□□ -1.05
LMO3-231ENST00000544754 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
LMO3-231ENST00000544754 ODF1Q14990 250 aa8.46□□□□□ -1.06
LMO3-231ENST00000544754 PET117Q6UWS5 81 aa8.46□□□□□ -1.06
LMO3-231ENST00000544754 CST9LQ9H4G1 147 aa8.46□□□□□ -1.06
LMO3-231ENST00000544754 Q9H8V8 135 aa8.46□□□□□ -1.06
LMO3-231ENST00000544754 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
LMO3-231ENST00000544754 AKR1D1P51857 326 aa8.45□□□□□ -1.06
LMO3-231ENST00000544754 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
LMO3-231ENST00000544754 CLPSL2Q6UWE3 100 aa8.45□□□□□ -1.06
LMO3-231ENST00000544754 LINC00269Q8N2A0 174 aa8.45□□□□□ -1.06
LMO3-231ENST00000544754 C2orf88Q9BSF0 95 aa8.45□□□□□ -1.06
LMO3-231ENST00000544754 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
LMO3-231ENST00000544754 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
LMO3-231ENST00000544754 REG3AQ06141 175 aa8.44□□□□□ -1.06
LMO3-231ENST00000544754 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
LMO3-231ENST00000544754 LGALS9CQ6DKI2 356 aa8.44□□□□□ -1.06
LMO3-231ENST00000544754 PMCHL2Q9BQD1 86 aa8.44□□□□□ -1.06
LMO3-231ENST00000544754 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
LMO3-231ENST00000544754 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
LMO3-231ENST00000544754 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
LMO3-231ENST00000544754 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
LMO3-231ENST00000544754 F8VRH5 84 aa8.43□□□□□ -1.06
LMO3-231ENST00000544754 UBE2D1P51668 147 aa8.43□□□□□ -1.06
LMO3-231ENST00000544754 ENHOQ6UWT2 76 aa8.43□□□□□ -1.06
LMO3-231ENST00000544754 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
LMO3-231ENST00000544754 A0A0J9YXV3 536 aa8.42□□□□□ -1.06
LMO3-231ENST00000544754 LINC00959A0A1B0GUT2 108 aa8.42□□□□□ -1.06
LMO3-231ENST00000544754 JOSD1Q15040 202 aaPredicted RBP8.42□□□□□ -1.06
LMO3-231ENST00000544754 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
LMO3-231ENST00000544754 C20orf202A1L168 122 aa8.41□□□□□ -1.06
LMO3-231ENST00000544754 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
LMO3-231ENST00000544754 CRPP02741 224 aa8.41□□□□□ -1.06
LMO3-231ENST00000544754 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
LMO3-231ENST00000544754 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
LMO3-231ENST00000544754 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
LMO3-231ENST00000544754 C11orf86A6NJI1 115 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 DPM2O94777 84 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 SS18Q15532 418 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 PYY3Q5JQD4 70 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 C10orf126Q8N4M7 172 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
LMO3-231ENST00000544754 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 TRAV9-2A0A087WT02 112 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 K7EP13 123 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 CCL25O15444 150 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 LY6G6CO95867 125 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 COX6A2Q02221 97 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 MIAQ16674 131 aa8.39□□□□□ -1.07
LMO3-231ENST00000544754 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms