RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.4
NELFA-216ENST00000542778 WFDC11Q8NEX6 87 aa12.52□□□□□ -0.4
NELFA-216ENST00000542778 KLK5Q9Y337 293 aaPredicted RBP12.52□□□□□ -0.41
NELFA-216ENST00000542778 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 LINC00643Q86TS7 51 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 LRRC75A-AS1Q8N1F1 130 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 DCANP1Q8TF63 244 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 J3QKU1 62 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 M0QY20 66 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 NDUFA12Q9UI09 145 aa12.51□□□□□ -0.41
NELFA-216ENST00000542778 J3KT08 172 aa12.5□□□□□ -0.41
NELFA-216ENST00000542778 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
NELFA-216ENST00000542778 DUX5Q96PT3 197 aa12.5□□□□□ -0.41
NELFA-216ENST00000542778 ATP5G1P05496 136 aa12.49□□□□□ -0.41
NELFA-216ENST00000542778 IGHV1-58A0A0C4DH39 117 aa12.49□□□□□ -0.41
NELFA-216ENST00000542778 A0A1B0GX51 115 aa12.49□□□□□ -0.41
NELFA-216ENST00000542778 SMIM9A6NGZ8 99 aa12.49□□□□□ -0.41
NELFA-216ENST00000542778 IGHG2P01859 326 aa12.49□□□□□ -0.41
NELFA-216ENST00000542778 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
NELFA-216ENST00000542778 UNQ9165/PRO28630Q6UXU0 137 aa12.49□□□□□ -0.41
NELFA-216ENST00000542778 KLLNB2CW77 178 aa12.48□□□□□ -0.41
NELFA-216ENST00000542778 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
NELFA-216ENST00000542778 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
NELFA-216ENST00000542778 MTORP42345 2549 aa12.47□□□□□ -0.41
NELFA-216ENST00000542778 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
NELFA-216ENST00000542778 NOTCH2Q04721 2471 aa12.46□□□□□ -0.41
NELFA-216ENST00000542778 FAM104AQ969W3 186 aa12.46□□□□□ -0.41
NELFA-216ENST00000542778 A8MZ25 164 aa12.46□□□□□ -0.42
NELFA-216ENST00000542778 COX7CP15954 63 aa12.46□□□□□ -0.42
NELFA-216ENST00000542778 SETD2Q9BYW2 2564 aaPredicted RBP12.45□□□□□ -0.42
NELFA-216ENST00000542778 PF4V1P10720 104 aa12.45□□□□□ -0.42
NELFA-216ENST00000542778 C5orf38Q86SI9 138 aa12.45□□□□□ -0.42
NELFA-216ENST00000542778 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
NELFA-216ENST00000542778 CD28P10747 220 aa12.45□□□□□ -0.42
NELFA-216ENST00000542778 CXCL5P42830 114 aa12.45□□□□□ -0.42
NELFA-216ENST00000542778 IGKV3-7A0A075B6H7 116 aa12.44□□□□□ -0.42
NELFA-216ENST00000542778 FSHBP01225 129 aa12.44□□□□□ -0.42
NELFA-216ENST00000542778 C2orf48Q96LS8 159 aa12.44□□□□□ -0.42
NELFA-216ENST00000542778 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
NELFA-216ENST00000542778 CITED2Q99967 270 aaPredicted RBP12.44□□□□□ -0.42
NELFA-216ENST00000542778 HIST2H2BDQ6DRA6 164 aa12.44□□□□□ -0.42
NELFA-216ENST00000542778 ANK3Q12955 4377 aaKnown RBP12.43□□□□□ -0.42
NELFA-216ENST00000542778 TRAV12-3A0A0B4J271 114 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 DAND5Q8N907 189 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 J3QLI3 93 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 CRYGAP11844 174 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 EDN2P20800 178 aa12.43□□□□□ -0.42
NELFA-216ENST00000542778 TIMM17BO60830 172 aa12.42□□□□□ -0.42
NELFA-216ENST00000542778 GAGE2AQ6NT46 116 aa12.42□□□□□ -0.42
NELFA-216ENST00000542778 PEMTQ9UBM1 199 aa12.42□□□□□ -0.42
NELFA-216ENST00000542778 NDUFA4O00483 81 aa12.42□□□□□ -0.42
NELFA-216ENST00000542778 COX7A2LO14548 114 aa12.42□□□□□ -0.42
NELFA-216ENST00000542778 RPS28P62857 69 aaKnown RBP12.42□□□□□ -0.42
NELFA-216ENST00000542778 DAZ2Q13117 558 aaKnown RBP12.41□□□□□ -0.42
NELFA-216ENST00000542778 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
NELFA-216ENST00000542778 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
NELFA-216ENST00000542778 DAZ1Q9NQZ3 744 aaKnown RBP12.41□□□□□ -0.42
NELFA-216ENST00000542778 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
NELFA-216ENST00000542778 FAM223BA6NKX1 122 aa12.4□□□□□ -0.42
NELFA-216ENST00000542778 CFHR3Q02985 330 aa12.4□□□□□ -0.42
NELFA-216ENST00000542778 FAM223AQ8IWN6 122 aa12.4□□□□□ -0.42
NELFA-216ENST00000542778 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
NELFA-216ENST00000542778 IGLV1-40P01703 118 aa12.39□□□□□ -0.43
NELFA-216ENST00000542778 HIST1H4AP62805 103 aaKnown RBP12.39□□□□□ -0.43
NELFA-216ENST00000542778 Q6YL49 198 aa12.39□□□□□ -0.43
NELFA-216ENST00000542778 TINCRA0A1B0GVN0 87 aa12.39□□□□□ -0.43
NELFA-216ENST00000542778 BEAN1Q3B7T3 259 aa12.38□□□□□ -0.43
NELFA-216ENST00000542778 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
NELFA-216ENST00000542778 hADV29S1A0JD25 119 aa12.37□□□□□ -0.43
NELFA-216ENST00000542778 TIRAPP58753 221 aa12.37□□□□□ -0.43
NELFA-216ENST00000542778 OR13C6PQ8NH95 151 aa12.37□□□□□ -0.43
NELFA-216ENST00000542778 ATOX1O00244 68 aa12.36□□□□□ -0.43
NELFA-216ENST00000542778 CYSTM1Q9H1C7 97 aa12.36□□□□□ -0.43
NELFA-216ENST00000542778 OTOGQ6ZRI0 2925 aa12.36□□□□□ -0.43
NELFA-216ENST00000542778 WIPF1O43516 503 aa12.36□□□□□ -0.43
NELFA-216ENST00000542778 BAALC-AS2P0C853 105 aa12.36□□□□□ -0.43
NELFA-216ENST00000542778 RHPN1-AS1Q9BWJ2 59 aa12.36□□□□□ -0.43
NELFA-216ENST00000542778 NIPBLQ6KC79 2804 aaeCLIP12.36□□□□□ -0.43
NELFA-216ENST00000542778 TRACP01848 142 aa12.35□□□□□ -0.43
NELFA-216ENST00000542778 NDUFA1O15239 70 aa12.35□□□□□ -0.43
NELFA-216ENST00000542778 PSMB8P28062 276 aa12.35□□□□□ -0.43
NELFA-216ENST00000542778 LINC00308Q8TCZ7 52 aa12.35□□□□□ -0.43
NELFA-216ENST00000542778 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
NELFA-216ENST00000542778 Q8N2B8 174 aa12.34□□□□□ -0.43
NELFA-216ENST00000542778 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
NELFA-216ENST00000542778 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
NELFA-216ENST00000542778 KRTAP1-1Q07627 177 aa12.33□□□□□ -0.44
NELFA-216ENST00000542778 USMG5Q96IX5 58 aa12.33□□□□□ -0.44
NELFA-216ENST00000542778 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
NELFA-216ENST00000542778 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
NELFA-216ENST00000542778 INAFM2P0DMQ5 153 aa12.32□□□□□ -0.44
NELFA-216ENST00000542778 CIRBPQ14011 172 aaKnown RBP12.32□□□□□ -0.44
NELFA-216ENST00000542778 SMR3AQ99954 134 aa12.31□□□□□ -0.44
NELFA-216ENST00000542778 SORL1Q92673 2214 aa12.31□□□□□ -0.44
NELFA-216ENST00000542778 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
NELFA-216ENST00000542778 H3BUA1 57 aa12.31□□□□□ -0.44
NELFA-216ENST00000542778 FAM218AQ96MZ4 157 aa12.31□□□□□ -0.44
NELFA-216ENST00000542778 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms