RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 ERASQ7Z444 233 aa8.48□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 MRPL52Q86TS9 123 aaKnown RBP8.48□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 IGLL5B9A064 214 aa8.47□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 UBE2L6O14933 153 aa8.47□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 TMEM141Q96I45 108 aa8.47□□□□□ -1.05
CACNA1C-IT3-201ENST00000542680 TRAV8-6A0A0B4J262 113 aa8.46□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 FABP4P15090 132 aa8.46□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 UBE2D4Q9Y2X8 147 aa8.46□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 IGIPA6NJ69 53 aa8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 SCGB3A1Q96QR1 104 aa8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 CHCHD5Q9BSY4 110 aa8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 A0A1B0GUV1 79 aa8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 FGF6P10767 208 aa8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 CCL18P55774 89 aa8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 MAP1LC3CQ9BXW4 147 aa8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 APLNQ9ULZ1 77 aa8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 MRPS16Q9Y3D3 137 aaKnown RBP8.44□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 A0A1B0GVY2 172 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 AKR1D1P51857 326 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 ESRGQ1W209 222 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 AMMECR1LQ6DCA0 310 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 Q6ZN92 141 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 SPATA12Q7Z6I5 190 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 DEFB104AQ8WTQ1 72 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 UPK3BQ9BT76 320 aa8.43□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 GAGE6Q13070 117 aa8.41□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 PET117Q6UWS5 81 aa8.41□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 A0A087WX48 190 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 C20orf202A1L168 122 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 SYS1-DBNDD2H3BUS1 97 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 K7EP13 123 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 C3orf79P0CE67 100 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 PMVKQ15126 192 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 OR10D4PQ8NGN7 298 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 BAALCQ8WXS3 180 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 AMELXQ99217 191 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 CDC42SE2Q9NRR3 84 aa8.4□□□□□ -1.06
CACNA1C-IT3-201ENST00000542680 LOC105371267A0A1B0GV96 52 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 PRSS1P07477 247 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 KRTDAPP60985 99 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 RBX1P62877 108 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 MPV17L2Q567V2 206 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 LINC01556Q5JQF7 62 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 LGALS9CQ6DKI2 356 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 ZNF664Q8N3J9 261 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 VCX2Q9H322 139 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 LINC00588Q9Y4M8 146 aa8.39□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 Q6ZUT4 128 aa8.38□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 CCL25O15444 150 aa8.37□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 LINC01545Q5VT33 79 aa8.37□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 WFDC10BQ8IUB3 73 aa8.37□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 IGLV4-60A0A075B6I1 120 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 F8VRH5 84 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 SIVA1O15304 175 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 SEC11AP67812 179 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 ODF1Q14990 250 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 JOSD1Q15040 202 aaPredicted RBP8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 C10orf126Q8N4M7 172 aa8.36□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 PRSS29PA6NIE9 313 aa8.35□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 Q8N976 141 aa8.35□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 PRR34Q9NV39 138 aa8.35□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 ANGP03950 147 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 PLNP26678 52 aa8.34□□□□□ -1.07
CACNA1C-IT3-201ENST00000542680 TRAV9-2A0A087WT02 112 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 H0Y8G0 127 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 SMIM6P0DI80 62 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 IGLC3P0DOY3 106 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 UBE2D1P51668 147 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 LINC00336Q6ZUF6 198 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 NFE4Q86UQ8 179 aa8.33□□□□□ -1.08
CACNA1C-IT3-201ENST00000542680 TRAV8-4A0A0B4J246 113 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms