RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PRO1854Q9UHT4 67 aa4.71□□□□□ -1.66
PTPRO-208ENST00000542557 FLNAP21333 2647 aaKnown RBP4.71□□□□□ -1.66
PTPRO-208ENST00000542557 TLN2Q9Y4G6 2542 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.7□□□□□ -1.66
PTPRO-208ENST00000542557 NDUFA7O95182 113 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 MRPL23Q16540 153 aaKnown RBP4.7□□□□□ -1.66
PTPRO-208ENST00000542557 VSIG2Q96IQ7 327 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 IGHV3-64A0A075B6Q5 118 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 TRGV1A0A0A0MS02 117 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 K7EQD1 137 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 DAZ2Q13117 558 aaKnown RBP4.7□□□□□ -1.66
PTPRO-208ENST00000542557 ATP6V0E2Q8NHE4 81 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 LITAFQ99732 161 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 SPANXDQ9BXN6 97 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 SPANXCQ9NY87 97 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 CHD6Q8TD26 2715 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 NBPF19A0A087WUL8 3843 aa4.7□□□□□ -1.66
PTPRO-208ENST00000542557 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 IGLV1-51P01701 117 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 ZFAND6Q6FIF0 208 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 FAM19A3Q7Z5A8 133 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 DAZ4Q86SG3 579 aaKnown RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 DAZ3Q9NR90 486 aaKnown RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 TENM4Q6N022 2769 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 IGHV3OR16-12A0A075B7B8 117 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 LOC107984156A0A0G2JMH3 177 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 HILS1P60008 231 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 SMAGPQ0VAQ4 97 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 RNASE13Q5GAN3 156 aaKnown RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 ARL17AQ8IVW1 177 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 C16orf74Q96GX8 76 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 C19orf73Q9NVV2 129 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 PDZD2O15018 2839 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 TRAV8-3A0A0A6YYJ7 113 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 TIMM17BO60830 172 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 IGHV3-33P01772 117 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 GIG44P09565 113 aaPredicted RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 ETDBQ3ZM63 59 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 Q6ZTI0 123 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 ZNF418Q8TF45 676 aaPredicted RBP4.69□□□□□ -1.66
PTPRO-208ENST00000542557 C1QTNF4Q9BXJ3 329 aa4.69□□□□□ -1.66
PTPRO-208ENST00000542557 SONP18583 2426 aaKnown RBP4.68□□□□□ -1.66
PTPRO-208ENST00000542557 ADARB2-AS1A8MUL3 147 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 PLA2G2AP14555 144 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 HIST2H2BCQ6DN03 193 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 SBSPONQ8IVN8 264 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 RNF183Q96D59 192 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 PLAC8L1A1L4L8 177 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 PSMB2P49721 201 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 SMCPP49901 116 aaPredicted RBP4.68□□□□□ -1.66
PTPRO-208ENST00000542557 HERVK_113P63121 156 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 MIAQ16674 131 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 MTURNQ8N3F0 131 aa4.68□□□□□ -1.66
PTPRO-208ENST00000542557 J3QKU1 62 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 NDUFA1O15239 70 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 TCL1BO95988 128 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 SPINK8P0C7L1 97 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 OVOL2Q9BRP0 275 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 GTSF1LQ9H1H1 148 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 ERG28Q9UKR5 140 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 IGLV5-39A0A0G2JS06 123 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 CSNK1G2-AS1Q8NCQ2 148 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 CDKN2A-AS1Q9UH64 79 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 CCDC168Q8NDH2 2452 aa4.67□□□□□ -1.66
PTPRO-208ENST00000542557 TRBV6-4A0A1B0GX49 114 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 IFITM1P13164 125 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 LINC00242Q5T6M2 205 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 NTM-AS1Q6ZSK4 140 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 SPATA25Q9BR10 227 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 NOP10Q9NPE3 64 aaKnown RBP4.66□□□□□ -1.66
PTPRO-208ENST00000542557 NF1P21359 2839 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 H7C423 109 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 J3QL48 77 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 LINC00694P0DN24 101 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 SFTA2Q6UW10 78 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 TMEM101Q96IK0 257 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 TRBV30A0A0K0K1B3 111 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 FOXI1Q12951 378 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 ADAMTSL4-AS1Q5T5F5 129 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.66□□□□□ -1.66
PTPRO-208ENST00000542557 WFDC10AQ9H1F0 79 aa4.66□□□□□ -1.66
PTPRO-208ENST00000542557 CUBNO60494 3623 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 GAGE12JA6NER3 117 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 SCGB1C2P0DMR2 95 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 GAGE4Q13068 117 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 GAGE5Q13069 117 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 TEN1Q86WV5 123 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 CDC42SE2Q9NRR3 84 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 FAM30AQ9NZY2 134 aa4.65□□□□□ -1.66
PTPRO-208ENST00000542557 SETXQ7Z333 2677 aaKnown RBP4.65□□□□□ -1.67
PTPRO-208ENST00000542557 RPL35AP18077 110 aaKnown RBP4.65□□□□□ -1.67
PTPRO-208ENST00000542557 COX6A2Q02221 97 aa4.65□□□□□ -1.67
PTPRO-208ENST00000542557 LINC01600Q96MT4 127 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms