RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ACANP16112 2415 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 TIRAPP58753 221 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 SIGMAR1Q99720 223 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 FAM110AQ9BQ89 295 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 GAGE12HA6NDE8 117 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 K7EQD1 137 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 TCL1BO95988 128 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 Q6ZTI0 123 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 SPANXDQ9BXN6 97 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 SPANXCQ9NY87 97 aa9.5□□□□□ -0.89
PRKAB1-206ENST00000541640 GIG44P09565 113 aaPredicted RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 FLNBO75369 2602 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 IGLV1-51P01701 117 aa9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 DAZ2Q13117 558 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 DAZ4Q86SG3 579 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 DAZ3Q9NR90 486 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 CSDC2Q9Y534 153 aaKnown RBP9.49□□□□□ -0.89
PRKAB1-206ENST00000541640 INSL3P51460 131 aa9.48□□□□□ -0.89
PRKAB1-206ENST00000541640 FAM19A3Q7Z5A8 133 aa9.48□□□□□ -0.89
PRKAB1-206ENST00000541640 SBSPONQ8IVN8 264 aa9.48□□□□□ -0.89
PRKAB1-206ENST00000541640 SMR3AQ99954 134 aa9.48□□□□□ -0.89
PRKAB1-206ENST00000541640 CDKN2A-AS1Q9UH64 79 aa9.48□□□□□ -0.89
PRKAB1-206ENST00000541640 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
PRKAB1-206ENST00000541640 A8MZ25 164 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 SCGB1C2P0DMR2 95 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 SONP18583 2426 aaKnown RBP9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 TIMM17BO60830 172 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 MIAQ16674 131 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 ZNF418Q8TF45 676 aaPredicted RBP9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 NOP10Q9NPE3 64 aaKnown RBP9.47□□□□□ -0.89
PRKAB1-206ENST00000541640 OTOGQ6ZRI0 2925 aa9.46□□□□□ -0.89
PRKAB1-206ENST00000541640 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
PRKAB1-206ENST00000541640 HERVK_113P63121 156 aa9.46□□□□□ -0.9
PRKAB1-206ENST00000541640 FOXI1Q12951 378 aa9.46□□□□□ -0.9
PRKAB1-206ENST00000541640 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.46□□□□□ -0.9
PRKAB1-206ENST00000541640 SPATA25Q9BR10 227 aa9.46□□□□□ -0.9
PRKAB1-206ENST00000541640 NDUFA1O15239 70 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 RNF183Q96D59 192 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 LY6G6DO95868 133 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 HILS1P60008 231 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 COX6A2Q02221 97 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 BAHCC1Q9P281 2608 aa9.45□□□□□ -0.9
PRKAB1-206ENST00000541640 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 NDUFA7O95182 113 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 PRSS2P07478 247 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 CSNK1G2-AS1Q8NCQ2 148 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 WNK1Q9H4A3 2382 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE4Q13068 117 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE5Q13069 117 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 OVOL2Q9BRP0 275 aa9.44□□□□□ -0.9
PRKAB1-206ENST00000541640 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
PRKAB1-206ENST00000541640 IFITM1P13164 125 aa9.43□□□□□ -0.9
PRKAB1-206ENST00000541640 RPL35AP18077 110 aaKnown RBP9.43□□□□□ -0.9
PRKAB1-206ENST00000541640 H7C2G1 150 aa9.43□□□□□ -0.9
PRKAB1-206ENST00000541640 M0QXV9 152 aa9.43□□□□□ -0.9
PRKAB1-206ENST00000541640 Q1RN00 199 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 PPDPFLQ8WWR9 84 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 CDC42SE2Q9NRR3 84 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE7O76087 117 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
PRKAB1-206ENST00000541640 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
PRKAB1-206ENST00000541640 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
PRKAB1-206ENST00000541640 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
PRKAB1-206ENST00000541640 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
PRKAB1-206ENST00000541640 H7C423 109 aa9.4□□□□□ -0.9
PRKAB1-206ENST00000541640 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
PRKAB1-206ENST00000541640 ATXN8Q156A1 80 aa9.4□□□□□ -0.9
PRKAB1-206ENST00000541640 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 TRIAP1O43715 76 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 SLC25A20O43772 301 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 CUBNO60494 3623 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 NF1P21359 2839 aa9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 ANK3Q12955 4377 aaKnown RBP9.39□□□□□ -0.91
PRKAB1-206ENST00000541640 C9JAW5 83 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms