RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 EDDM3BP56851 147 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 SNRPD3P62318 126 aaKnown RBP3.71□□□□□ -1.82
DDB1-219ENST00000541513 RPL30P62888 115 aaKnown RBP3.71□□□□□ -1.82
DDB1-219ENST00000541513 SYCNQ0VAF6 134 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 ELOBQ15370 118 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 MRPL51Q4U2R6 128 aaKnown RBP3.71□□□□□ -1.82
DDB1-219ENST00000541513 C9orf129Q5T035 196 aaKnown RBP3.71□□□□□ -1.82
DDB1-219ENST00000541513 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.71□□□□□ -1.82
DDB1-219ENST00000541513 DAND5Q8N907 189 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 PPDPFLQ8WWR9 84 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 ZNF714Q96N38 554 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 SMR3AQ99954 134 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 LINC00574Q9H8X3 128 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 CELA1Q9UNI1 258 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 PHLDA3Q9Y5J5 127 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 TRBV7-7A0A0K0K1E9 115 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 C17orf98A8MV24 154 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 LYRM1O43325 122 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 SLPIP03973 132 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 CBLN1P23435 193 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 CSN1S1P47710 185 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 TSPEAR-AS2P59090 65 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 ZNF345Q14585 488 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 HIGD2BQ4VC39 106 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 C6orf201Q7Z4U5 140 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 C15orf53Q8NAA6 179 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 ARHGAP5-AS1Q96IT6 56 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 SLC35B3Q9H1N7 401 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 C11orf1Q9H5F2 150 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 ZNRD1Q9P1U0 126 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 V9GYH0 126 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 SVEP1Q4LDE5 3571 aa3.7□□□□□ -1.82
DDB1-219ENST00000541513 MUC21A0A140T8X8 626 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 CCL3L1P16619 93 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 UBE2BP63146 152 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 VMO1Q7Z5L0 202 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 C18orf32Q8TCD1 76 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 MYOZ3Q8TDC0 251 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 TNFRSF19Q9NS68 423 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 LINC00588Q9Y4M8 146 aa3.69□□□□□ -1.82
DDB1-219ENST00000541513 TNCP24821 2201 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 COL6A5A8TX70 2615 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 TRAV40A0A0B4J280 105 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 KANTRA0A1W2PQU2 76 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 ODF3BA8MYP8 253 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 IGHV1-69P01742 117 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 IL5P05113 134 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 S100A4P26447 101 aaKnown RBP3.68□□□□□ -1.82
DDB1-219ENST00000541513 DYNLT3P51808 116 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 HIST1H4AP62805 103 aaKnown RBP3.68□□□□□ -1.82
DDB1-219ENST00000541513 HCP5Q6MZN7 132 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 CYYR1Q96J86 154 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 PLXNB1O43157 2135 aa3.68□□□□□ -1.82
DDB1-219ENST00000541513 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 A6NDX4 124 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 C17orf112F2Z3M2 114 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 TCL1BO95988 128 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 IGLV1-47P01700 117 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 HBDP02042 147 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 CD28P10747 220 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 RPL27AP46776 148 aaKnown RBP3.67□□□□□ -1.82
DDB1-219ENST00000541513 ZNF79Q15937 498 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 MINOS1Q5TGZ0 78 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 Q6ZTC4 211 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 SBSPONQ8IVN8 264 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 Q8N9W7 124 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 DSCR8Q96T75 97 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 DPH3P1Q9H4G8 78 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 MINOS1-NBL1R4GNA1 71 aa3.67□□□□□ -1.82
DDB1-219ENST00000541513 TRBV6-7A0A0A0MS04 114 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 H3BUT2 72 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 SDCBPO00560 298 aaPredicted RBP3.66□□□□□ -1.82
DDB1-219ENST00000541513 IGKCP01834 107 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 ZNF137PP52743 207 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 ATP5EP56381 51 aaPredicted RBP3.66□□□□□ -1.82
DDB1-219ENST00000541513 SSBP1Q04837 148 aaKnown RBP3.66□□□□□ -1.82
DDB1-219ENST00000541513 WFDC2Q14508 124 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 C18orf65Q6ZTR6 163 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 Q8N2B8 174 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 C3orf56Q8N813 242 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 HHLA3Q9XRX5 114 aa3.66□□□□□ -1.82
DDB1-219ENST00000541513 STAB1Q9NY15 2570 aa3.65□□□□□ -1.82
DDB1-219ENST00000541513 A8MWP4 228 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 ATOX1O00244 68 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 LEPROTO15243 131 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 RNASE4P34096 147 aaKnown RBP3.65□□□□□ -1.83
DDB1-219ENST00000541513 FAUP35544 74 aaKnown RBP3.65□□□□□ -1.83
DDB1-219ENST00000541513 PRB3Q04118 309 aaPredicted RBP3.65□□□□□ -1.83
DDB1-219ENST00000541513 ZNF816Q0VGE8 651 aaPredicted RBP3.65□□□□□ -1.83
DDB1-219ENST00000541513 DEFB112Q30KQ8 113 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 NMSQ5H8A3 153 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 BRD3OSQ6XYD6 125 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms