RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 COA6Q5JTJ3 125 aaKnown RBP3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 FA2HQ7L5A8 372 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 WFDC10BQ8IUB3 73 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 UBE2DNLQ8IWF7 75 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 C20orf203Q8NBC4 194 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BHQ93079 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 TMEM18Q96B42 140 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 CHCHD1Q96BP2 118 aaKnown RBP3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 URB1-AS1Q96HZ7 61 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BNQ99877 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 HIST1H2BMQ99879 126 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 CHCHD5Q9BSY4 110 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 Q9H8V8 135 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 SPANXA1Q9NS26 97 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 PYGO1Q9Y3Y4 419 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 COL7A1Q02388 2944 aa3.39□□□□□ -1.87
SPARCL1-209ENST00000541496 A0A087WX48 190 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 LCE6AA0A183 80 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 FGF6P10767 208 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 PTTG1IPP53801 180 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 RBX1P62877 108 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 TTC32Q5I0X7 151 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 C10orf126Q8N4M7 172 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 TOMM6Q96B49 74 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 PRR34Q9NV39 138 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 CYSLTR1Q9Y271 337 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 UBE2D4Q9Y2X8 147 aa3.38□□□□□ -1.87
SPARCL1-209ENST00000541496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 TRAV9-2A0A087WT02 112 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 A0A096LNJ9 63 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 IGIPA6NJ69 53 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 UBE2L6O14933 153 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 SERF1AO75920 110 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 LY6G6CO95867 125 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 MRPS36P82909 103 aaKnown RBP3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 GAGE6Q13070 117 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 MPV17L2Q567V2 206 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 RNASEKQ6P5S7 137 aaKnown RBP3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 Q6ZR54 194 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 ERASQ7Z444 233 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 BAGE3Q86Y29 109 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 OR5A1Q8NGJ0 315 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 DEFB104AQ8WTQ1 72 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 TIMM17AQ99595 171 aa3.37□□□□□ -1.87
SPARCL1-209ENST00000541496 TGP01266 2768 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 IGLV4-60A0A075B6I1 120 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 TMEM262E9PQX1 116 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 HSBP1O75506 76 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 HBDP02042 147 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 RPL39P62891 51 aaKnown RBP3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 PDZD11Q5EBL8 140 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 PAPPA-AS1Q5QFB9 102 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 AMMECR1LQ6DCA0 310 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 Q8N976 141 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 TMEM141Q96I45 108 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 TMEM101Q96IK0 257 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 PACRGQ96M98 296 aaPredicted RBP3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 KRTAP1-5Q9BYS1 174 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 CDC42SE2Q9NRR3 84 aa3.36□□□□□ -1.87
SPARCL1-209ENST00000541496 IGLV4-3A0A075B6K6 122 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 TRAV8-3A0A0A6YYJ7 113 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 CCL25O15444 150 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 NUPR1O60356 82 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 ATP5LO75964 103 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 IGHV3-30P01768 117 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 IGHV3-33P01772 117 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 ANGP03950 147 aaKnown RBP3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 IGHV3-30-3P0DP02 117 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 IGHV3-30-5P0DP03 117 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 MIAQ16674 131 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 DGAT2L7PQ6IED9 249 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 ENHOQ6UWT2 76 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 Q6ZN92 141 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 Q6ZUT4 128 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 ZNF664Q8N3J9 261 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 SCGB3A1Q96QR1 104 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 AMELXQ99217 191 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 NACAE9PAV3 2078 aa3.35□□□□□ -1.87
SPARCL1-209ENST00000541496 TRAV8-4A0A0B4J246 113 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 NDUFA6P56556 154 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 REG3AQ06141 175 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 PMCHL1Q16048 86 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 NFE4Q86UQ8 179 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC00269Q8N2A0 174 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 FAM19A2Q8N3H0 131 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 UBE2WQ96B02 151 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 RMI2Q96E14 147 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 HSPB8Q9UJY1 196 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 COX11Q9Y6N1 276 aa3.34□□□□□ -1.87
SPARCL1-209ENST00000541496 LINC00959A0A1B0GUT2 108 aa3.33□□□□□ -1.88
SPARCL1-209ENST00000541496 LEPROTL1O95214 131 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms