RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
LMO3-223ENST00000540590 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
LMO3-223ENST00000540590 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
LMO3-223ENST00000540590 FAM229AH3BQW9 127 aa8.56□□□□□ -1.04
LMO3-223ENST00000540590 LEPROTL1O95214 131 aa8.56□□□□□ -1.04
LMO3-223ENST00000540590 FGF6P10767 208 aa8.56□□□□□ -1.04
LMO3-223ENST00000540590 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
LMO3-223ENST00000540590 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
LMO3-223ENST00000540590 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
LMO3-223ENST00000540590 IGIPA6NJ69 53 aa8.55□□□□□ -1.04
LMO3-223ENST00000540590 AKR1D1P51857 326 aa8.55□□□□□ -1.04
LMO3-223ENST00000540590 TMEM101Q96IK0 257 aa8.55□□□□□ -1.04
LMO3-223ENST00000540590 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
LMO3-223ENST00000540590 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
LMO3-223ENST00000540590 AMMECR1LQ6DCA0 310 aa8.54□□□□□ -1.04
LMO3-223ENST00000540590 DGAT2L7PQ6IED9 249 aa8.54□□□□□ -1.04
LMO3-223ENST00000540590 Q6ZN92 141 aa8.54□□□□□ -1.04
LMO3-223ENST00000540590 WFDC10BQ8IUB3 73 aa8.54□□□□□ -1.04
LMO3-223ENST00000540590 OPRPNQ99935 248 aaPredicted RBP8.54□□□□□ -1.04
LMO3-223ENST00000540590 A0A087WX48 190 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 TMEM262E9PQX1 116 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 CCL25O15444 150 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 DNAH10OSP0CZ25 163 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 MPV17L2Q567V2 206 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 LINC01556Q5JQF7 62 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 Q6ZUT4 128 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 FAM104AQ969W3 186 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
LMO3-223ENST00000540590 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
LMO3-223ENST00000540590 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
LMO3-223ENST00000540590 RBX1P62877 108 aa8.52□□□□□ -1.05
LMO3-223ENST00000540590 C10orf126Q8N4M7 172 aa8.52□□□□□ -1.05
LMO3-223ENST00000540590 Q8N976 141 aa8.52□□□□□ -1.05
LMO3-223ENST00000540590 TRAV9-2A0A087WT02 112 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
LMO3-223ENST00000540590 CASC10Q5T4H9 136 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 SPATA12Q7Z6I5 190 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 BAALCQ8WXS3 180 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
LMO3-223ENST00000540590 TRAV12-1A0A0B4J245 112 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 SIVA1O15304 175 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 KRTDAPP60985 99 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 LGALS9CQ6DKI2 356 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 UBE2DNLQ8IWF7 75 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
LMO3-223ENST00000540590 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 IGHV3-30-3P0DP02 117 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 SEC11AP67812 179 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 TTC32Q5I0X7 151 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 AMELXQ99217 191 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 VCX2Q9H322 139 aa8.49□□□□□ -1.05
LMO3-223ENST00000540590 LOC105371267A0A1B0GV96 52 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 A6NJY4 79 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 H0Y8G0 127 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 SYS1-DBNDD2H3BUS1 97 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 PRSS1P07477 247 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 PMVKQ15126 192 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
LMO3-223ENST00000540590 C20orf202A1L168 122 aa8.47□□□□□ -1.05
LMO3-223ENST00000540590 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
LMO3-223ENST00000540590 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
LMO3-223ENST00000540590 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
LMO3-223ENST00000540590 STARD9Q9P2P6 4700 aa8.47□□□□□ -1.05
LMO3-223ENST00000540590 TRAV8-4A0A0B4J246 113 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 ODF1Q14990 250 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 MIAQ16674 131 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 FAM19A3Q7Z5A8 133 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 CST9LQ9H4G1 147 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 Q9H8V8 135 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
LMO3-223ENST00000540590 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
LMO3-223ENST00000540590 TRAV8-3A0A0A6YYJ7 113 aa8.45□□□□□ -1.06
LMO3-223ENST00000540590 CRPP02741 224 aa8.45□□□□□ -1.06
LMO3-223ENST00000540590 CLPSL2Q6UWE3 100 aa8.45□□□□□ -1.06
LMO3-223ENST00000540590 LINC00269Q8N2A0 174 aa8.45□□□□□ -1.06
LMO3-223ENST00000540590 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 F8VRH5 84 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 REG3AQ06141 175 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 RMI2Q96E14 147 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 PMCHL2Q9BQD1 86 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
LMO3-223ENST00000540590 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
LMO3-223ENST00000540590 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
LMO3-223ENST00000540590 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
LMO3-223ENST00000540590 IBA57-AS1B1ANH7 110 aa8.43□□□□□ -1.06
LMO3-223ENST00000540590 PLNP26678 52 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms