RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 UBE2D4Q9Y2X8 147 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 UNC79Q9P2D8 2635 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 FSHBP01225 129 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 INSP01308 110 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 COX6A2Q02221 97 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
BNIP3-202ENST00000540159 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 IGHV3-33P01772 117 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 GAGE4Q13068 117 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 GAGE5Q13069 117 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 CITED2Q99967 270 aaPredicted RBP9.86□□□□□ -0.83
BNIP3-202ENST00000540159 ESM1Q9NQ30 184 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 DNAJC9-AS1A6NH13 148 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 C4orf3Q8WVX3 66 aa9.86□□□□□ -0.83
BNIP3-202ENST00000540159 TMEM263Q8WUH6 116 aaKnown RBP9.85□□□□□ -0.83
BNIP3-202ENST00000540159 NOP10Q9NPE3 64 aaKnown RBP9.85□□□□□ -0.83
BNIP3-202ENST00000540159 MT-ATP8P03928 68 aa9.85□□□□□ -0.83
BNIP3-202ENST00000540159 LOC100131303A0A0U1RQF7 123 aa9.84□□□□□ -0.83
BNIP3-202ENST00000540159 C1orf158Q8N1D5 194 aa9.84□□□□□ -0.83
BNIP3-202ENST00000540159 SLC25A20O43772 301 aa9.84□□□□□ -0.83
BNIP3-202ENST00000540159 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
BNIP3-202ENST00000540159 MRPS36P82909 103 aaKnown RBP9.84□□□□□ -0.83
BNIP3-202ENST00000540159 IGHV1-58A0A0C4DH39 117 aa9.83□□□□□ -0.84
BNIP3-202ENST00000540159 CCL24O00175 119 aa9.83□□□□□ -0.84
BNIP3-202ENST00000540159 TRIAP1O43715 76 aa9.83□□□□□ -0.84
BNIP3-202ENST00000540159 ATRQ13535 2644 aa9.83□□□□□ -0.84
BNIP3-202ENST00000540159 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
BNIP3-202ENST00000540159 GAGE7O76087 117 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 GAGE12FP0CL80 117 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 GAGE12GP0CL81 117 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 GAGE12IP0CL82 117 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 RNF152Q8N8N0 203 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 PDZD2O15018 2839 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
BNIP3-202ENST00000540159 LITAFQ99732 161 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
BNIP3-202ENST00000540159 XGP55808 180 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 TEN1Q86WV5 123 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 CDIP1Q9H305 208 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 KRTAP1-3Q8IUG1 177 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 SPATA25Q9BR10 227 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 Q9H8V8 135 aa9.81□□□□□ -0.84
BNIP3-202ENST00000540159 TEX49A0A1B0GTD5 131 aa9.8□□□□□ -0.84
BNIP3-202ENST00000540159 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
BNIP3-202ENST00000540159 TRGV2A0A075B6R0 118 aa9.8□□□□□ -0.84
BNIP3-202ENST00000540159 OTOGQ6ZRI0 2925 aa9.8□□□□□ -0.84
BNIP3-202ENST00000540159 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
BNIP3-202ENST00000540159 NTM-AS1Q6ZSK4 140 aa9.79□□□□□ -0.84
BNIP3-202ENST00000540159 TRBV20-1A0A075B6N2 111 aa9.79□□□□□ -0.84
BNIP3-202ENST00000540159 PPDPFLQ8WWR9 84 aa9.79□□□□□ -0.84
BNIP3-202ENST00000540159 SMR3AQ99954 134 aa9.78□□□□□ -0.84
BNIP3-202ENST00000540159 YAE1D1Q9NRH1 226 aa9.78□□□□□ -0.84
BNIP3-202ENST00000540159 TOMM7Q9P0U1 55 aa9.78□□□□□ -0.84
BNIP3-202ENST00000540159 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
BNIP3-202ENST00000540159 RPL13AP40429 203 aaKnown RBP9.78□□□□□ -0.84
BNIP3-202ENST00000540159 SPANXA1Q9NS26 97 aa9.78□□□□□ -0.84
BNIP3-202ENST00000540159 MEIG1Q5JSS6 88 aa9.77□□□□□ -0.84
BNIP3-202ENST00000540159 TRRAPQ9Y4A5 3859 aa9.77□□□□□ -0.85
BNIP3-202ENST00000540159 RS1O15537 224 aa9.77□□□□□ -0.85
BNIP3-202ENST00000540159 LINC00242Q5T6M2 205 aa9.77□□□□□ -0.85
BNIP3-202ENST00000540159 Q8N2B8 174 aa9.77□□□□□ -0.85
BNIP3-202ENST00000540159 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
BNIP3-202ENST00000540159 C11orf68Q9H3H3 251 aaKnown RBP9.76□□□□□ -0.85
BNIP3-202ENST00000540159 ICOSQ9Y6W8 199 aa9.76□□□□□ -0.85
BNIP3-202ENST00000540159 A0A0B4J2C4 111 aa9.76□□□□□ -0.85
BNIP3-202ENST00000540159 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
BNIP3-202ENST00000540159 LINC01620Q4KN68 170 aa9.76□□□□□ -0.85
BNIP3-202ENST00000540159 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
BNIP3-202ENST00000540159 A0A096LPF7 62 aa9.76□□□□□ -0.85
BNIP3-202ENST00000540159 CIDEAO60543 219 aa9.76□□□□□ -0.85
BNIP3-202ENST00000540159 MIAQ16674 131 aa9.76□□□□□ -0.85
BNIP3-202ENST00000540159 GAGE6Q13070 117 aa9.75□□□□□ -0.85
BNIP3-202ENST00000540159 K7EQD1 137 aa9.75□□□□□ -0.85
BNIP3-202ENST00000540159 DEFB130BP0DP73 79 aa9.75□□□□□ -0.85
BNIP3-202ENST00000540159 DEFB130AP0DP74 79 aa9.75□□□□□ -0.85
BNIP3-202ENST00000540159 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
BNIP3-202ENST00000540159 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
BNIP3-202ENST00000540159 LINC01006Q8NI28 216 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 A8MTW9 85 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 ATXN8Q156A1 80 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 BEAN1Q3B7T3 259 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 ZFAND6Q6FIF0 208 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
BNIP3-202ENST00000540159 UBE2L6O14933 153 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 CKS1BP61024 79 aa9.74□□□□□ -0.85
BNIP3-202ENST00000540159 C2orf82Q6UX34 121 aa9.73□□□□□ -0.85
BNIP3-202ENST00000540159 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
BNIP3-202ENST00000540159 TRGV4A0A0C4DH28 118 aa9.72□□□□□ -0.85
BNIP3-202ENST00000540159 GIG44P09565 113 aaPredicted RBP9.72□□□□□ -0.85
BNIP3-202ENST00000540159 TEP1Q99973 2627 aaKnown RBP9.72□□□□□ -0.85
BNIP3-202ENST00000540159 CRLF1O75462 422 aa9.72□□□□□ -0.85
BNIP3-202ENST00000540159 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.85
BNIP3-202ENST00000540159 ATP6V0E2Q8NHE4 81 aa9.71□□□□□ -0.85
BNIP3-202ENST00000540159 SMIM1B2RUZ4 78 aa9.71□□□□□ -0.85
BNIP3-202ENST00000540159 DEFB4AO15263 64 aa9.71□□□□□ -0.86
BNIP3-202ENST00000540159 CRYBA4P53673 196 aa9.71□□□□□ -0.86
BNIP3-202ENST00000540159 H7C423 109 aa9.7□□□□□ -0.86
BNIP3-202ENST00000540159 DNAJC30Q96LL9 226 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms