RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 VWFP04275 2813 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 ATP5G1P05496 136 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 AMMECR1LQ6DCA0 310 aa12.1□□□□□ -0.47
LTBR-207ENST00000539925 OR5A1Q8NGJ0 315 aa12.09□□□□□ -0.47
LTBR-207ENST00000539925 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
LTBR-207ENST00000539925 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
LTBR-207ENST00000539925 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
LTBR-207ENST00000539925 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
LTBR-207ENST00000539925 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
LTBR-207ENST00000539925 TIRAPP58753 221 aa12.08□□□□□ -0.48
LTBR-207ENST00000539925 Q6ZUT4 128 aa12.08□□□□□ -0.48
LTBR-207ENST00000539925 ATP6V0E2Q8NHE4 81 aa12.08□□□□□ -0.48
LTBR-207ENST00000539925 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
LTBR-207ENST00000539925 PAX4O43316 350 aa12.07□□□□□ -0.48
LTBR-207ENST00000539925 SH2D6Q7Z4S9 175 aa12.07□□□□□ -0.48
LTBR-207ENST00000539925 TP73-AS1Q9UF72 201 aa12.07□□□□□ -0.48
LTBR-207ENST00000539925 LEPROTO15243 131 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 GYPEP15421 78 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 UBE2D1P51668 147 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
LTBR-207ENST00000539925 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
LTBR-207ENST00000539925 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 LOC100131303A0A0U1RQF7 123 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 A6NDN8 102 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 H3BRM9 83 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 ORAOV1Q8WV07 137 aa12.06□□□□□ -0.48
LTBR-207ENST00000539925 ZNF815PA8K554 130 aa12.05□□□□□ -0.48
LTBR-207ENST00000539925 LGALS3P17931 250 aaKnown RBP12.05□□□□□ -0.48
LTBR-207ENST00000539925 HERVK_113P63121 156 aa12.05□□□□□ -0.48
LTBR-207ENST00000539925 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
LTBR-207ENST00000539925 A0A1B0GV90 55 aa12.04□□□□□ -0.48
LTBR-207ENST00000539925 J3QQQ9 107 aa12.04□□□□□ -0.48
LTBR-207ENST00000539925 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
LTBR-207ENST00000539925 LURAP1LQ8IV03 231 aa12.03□□□□□ -0.48
LTBR-207ENST00000539925 TTTY13Q9BZ97 58 aa12.03□□□□□ -0.48
LTBR-207ENST00000539925 C11orf68Q9H3H3 251 aaKnown RBP12.03□□□□□ -0.48
LTBR-207ENST00000539925 IGLV5-45A0A087WSX0 123 aa12.03□□□□□ -0.48
LTBR-207ENST00000539925 SCGB1D4Q6XE38 83 aa12.02□□□□□ -0.49
LTBR-207ENST00000539925 G3V4G9 280 aa12.01□□□□□ -0.49
LTBR-207ENST00000539925 DEFB4AO15263 64 aa12.01□□□□□ -0.49
LTBR-207ENST00000539925 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
LTBR-207ENST00000539925 CHCHD5Q9BSY4 110 aa12.01□□□□□ -0.49
LTBR-207ENST00000539925 TM2D2Q9BX73 214 aa12.01□□□□□ -0.49
LTBR-207ENST00000539925 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
LTBR-207ENST00000539925 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
LTBR-207ENST00000539925 CELA1Q9UNI1 258 aa12□□□□□ -0.49
LTBR-207ENST00000539925 RNASE13Q5GAN3 156 aaKnown RBP12□□□□□ -0.49
LTBR-207ENST00000539925 A0A1B0GUV1 79 aa11.99□□□□□ -0.49
LTBR-207ENST00000539925 F5H768 121 aa11.99□□□□□ -0.49
LTBR-207ENST00000539925 CEND1Q8N111 149 aa11.99□□□□□ -0.49
LTBR-207ENST00000539925 HIST1H4GQ99525 98 aa11.99□□□□□ -0.49
LTBR-207ENST00000539925 H3BNG1 76 aa11.98□□□□□ -0.49
LTBR-207ENST00000539925 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
LTBR-207ENST00000539925 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
LTBR-207ENST00000539925 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
LTBR-207ENST00000539925 GCSHP23434 173 aa11.97□□□□□ -0.49
LTBR-207ENST00000539925 GAGE6Q13070 117 aa11.97□□□□□ -0.49
LTBR-207ENST00000539925 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
LTBR-207ENST00000539925 SPANXB1Q9NS25 103 aaPredicted RBP11.97□□□□□ -0.49
LTBR-207ENST00000539925 CCL25O15444 150 aa11.97□□□□□ -0.49
LTBR-207ENST00000539925 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
LTBR-207ENST00000539925 COX11Q9Y6N1 276 aa11.97□□□□□ -0.49
LTBR-207ENST00000539925 PTTG1IPP53801 180 aa11.96□□□□□ -0.5
LTBR-207ENST00000539925 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.5
LTBR-207ENST00000539925 TRAV13-1A0A0B4J241 112 aa11.95□□□□□ -0.5
LTBR-207ENST00000539925 TMEM238LA0A1B0GVL6 79 aa11.95□□□□□ -0.5
LTBR-207ENST00000539925 A6NJY4 79 aa11.95□□□□□ -0.5
LTBR-207ENST00000539925 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
LTBR-207ENST00000539925 A0A0J9YY99 117 aa11.94□□□□□ -0.5
LTBR-207ENST00000539925 TSPEAR-AS2P59090 65 aa11.94□□□□□ -0.5
LTBR-207ENST00000539925 SRSF9Q13242 221 aaKnown RBP eCLIP11.94□□□□□ -0.5
LTBR-207ENST00000539925 KPRPQ5T749 579 aaPredicted RBP11.94□□□□□ -0.5
LTBR-207ENST00000539925 CDKN2A-AS1Q9UH64 79 aa11.94□□□□□ -0.5
LTBR-207ENST00000539925 C12orf74Q32Q52 190 aa11.94□□□□□ -0.5
LTBR-207ENST00000539925 SPATA25Q9BR10 227 aa11.94□□□□□ -0.5
LTBR-207ENST00000539925 TAX1BP3O14907 124 aa11.93□□□□□ -0.5
LTBR-207ENST00000539925 SMIM13P0DJ93 91 aa11.93□□□□□ -0.5
LTBR-207ENST00000539925 COL6A5A8TX70 2615 aa11.92□□□□□ -0.5
LTBR-207ENST00000539925 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
LTBR-207ENST00000539925 TMEM238C9JI98 176 aa11.92□□□□□ -0.5
LTBR-207ENST00000539925 HTN3P15516 51 aa11.92□□□□□ -0.5
LTBR-207ENST00000539925 ZFAND6Q6FIF0 208 aa11.92□□□□□ -0.5
LTBR-207ENST00000539925 TMEM262E9PQX1 116 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 LELP1Q5T871 98 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 NDUFA12Q9UI09 145 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 FXYD2P54710 66 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 Q6ZVH6 145 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 RETNQ9HD89 108 aa11.91□□□□□ -0.5
LTBR-207ENST00000539925 IGLV4-60A0A075B6I1 120 aa11.9□□□□□ -0.5
LTBR-207ENST00000539925 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.5
LTBR-207ENST00000539925 RBX1P62877 108 aa11.9□□□□□ -0.5
LTBR-207ENST00000539925 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
LTBR-207ENST00000539925 TIMM17BO60830 172 aa11.89□□□□□ -0.51
LTBR-207ENST00000539925 COX6A2Q02221 97 aa11.89□□□□□ -0.51
LTBR-207ENST00000539925 NDUFA1O15239 70 aa11.88□□□□□ -0.51
LTBR-207ENST00000539925 SS18Q15532 418 aa11.88□□□□□ -0.51
LTBR-207ENST00000539925 A0A096LPF7 62 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms