RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 BRD3OSQ6XYD6 125 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
CCDC60-204ENST00000539847 USMG5Q96IX5 58 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 FAM110AQ9BQ89 295 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 TMEM126AQ9H061 195 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 SIRPDQ9H106 197 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 TP53TG1Q9Y2A0 90 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 PYGO1Q9Y3Y4 419 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 PLXNB1O43157 2135 aa5.66□□□□□ -1.5
CCDC60-204ENST00000539847 TENM3Q9P273 2699 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 IGHV3OR16-10A0A075B7F0 116 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 TRAV8-4A0A0B4J246 113 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 A4D1N5 150 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 KLLNB2CW77 178 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 C9JAW5 83 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 TIMM17BO60830 172 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 COX6CP09669 75 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 EDN2P20800 178 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 KRTAP10-3P60369 221 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 PRR9Q5T870 116 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 KLK15Q9H2R5 256 aa5.65□□□□□ -1.5
CCDC60-204ENST00000539847 TRBV7-7A0A0K0K1E9 115 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 K7EMT4 169 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 ATP6V0E1O15342 81 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 Q6ZSV7 163 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 ZNRF2Q8NHG8 242 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 C20orf173Q96LM9 149 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 PPDPFQ9H3Y8 114 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 VPREB3Q9UKI3 123 aa5.64□□□□□ -1.51
CCDC60-204ENST00000539847 IGHV4-59P01825 116 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 ATP5G1P05496 136 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 MGPP08493 103 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 PRB4P10163 310 aaPredicted RBP5.63□□□□□ -1.51
CCDC60-204ENST00000539847 ID1P41134 155 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 TSPEAR-AS2P59090 65 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 PRB3Q04118 309 aaPredicted RBP5.63□□□□□ -1.51
CCDC60-204ENST00000539847 SUMO4Q6EEV6 95 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 TRPT1Q86TN4 253 aaKnown RBP5.63□□□□□ -1.51
CCDC60-204ENST00000539847 MUSTN1Q8IVN3 82 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 C9orf85Q96MD7 179 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 ZNF256Q9Y2P7 627 aaPredicted RBP5.63□□□□□ -1.51
CCDC60-204ENST00000539847 AGRNO00468 2067 aa5.63□□□□□ -1.51
CCDC60-204ENST00000539847 KMT2CQ8NEZ4 4911 aaKnown RBP5.63□□□□□ -1.51
CCDC60-204ENST00000539847 TRAV2A0A0B4J234 112 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 H3BMM0 161 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 M0QY20 66 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 GNRH2O43555 120 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 IGF1P05019 195 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
CCDC60-204ENST00000539847 PIK3CD-AS1Q5SR53 167 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 FAM159AQ6UWV7 190 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 C5orf56Q8N8D9 126 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 C15orf53Q8NAA6 179 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 C20orf203Q8NBC4 194 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 NTN5Q8WTR8 489 aaPredicted RBP5.62□□□□□ -1.51
CCDC60-204ENST00000539847 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 ZNF580Q9UK33 172 aa5.62□□□□□ -1.51
CCDC60-204ENST00000539847 TRAV41A0A0B4J266 112 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 TRAV4A0A0B4J268 109 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 LINC01548A6NM66 108 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 I3L3M4 83 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 MRPS36P82909 103 aaKnown RBP5.61□□□□□ -1.51
CCDC60-204ENST00000539847 ECSCRQ19T08 205 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 COPS9Q8WXC6 57 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
CCDC60-204ENST00000539847 IGHV3-35A0A0C4DH35 117 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 IGHV3-66A0A0C4DH42 116 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 H7C423 109 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 LST1O00453 97 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 C2orf82Q6UX34 121 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 Q6ZQT7 251 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 LITAFQ99732 161 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 SS18L2Q9UHA2 77 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 MOB4Q9Y3A3 225 aa5.6□□□□□ -1.51
CCDC60-204ENST00000539847 IGHV3OR16-8A0A075B7F1 116 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 IGHV3-16A0A0C4DH30 117 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 TINCRA0A1B0GVN0 87 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 G3V318 75 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 PAX4O43316 350 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 RPL39P62891 51 aaKnown RBP5.59□□□□□ -1.51
CCDC60-204ENST00000539847 MIAQ16674 131 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 MRAPQ8TCY5 172 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 ICOSQ9Y6W8 199 aa5.59□□□□□ -1.51
CCDC60-204ENST00000539847 IGLV4-3A0A075B6K6 122 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 NPFFO15130 113 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 CXCL5P42830 114 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 Q1RN00 199 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 Q8N2B8 174 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 TMEM101Q96IK0 257 aa5.58□□□□□ -1.52
CCDC60-204ENST00000539847 IGHV3OR16-13A0A075B7E8 117 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 IGHV3-74A0A0B4J1X5 117 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 TEX49A0A1B0GTD5 131 aa5.57□□□□□ -1.52
CCDC60-204ENST00000539847 CCDC179H3BU77 68 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms