RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 BCL9LQ86UU0 1499 aa0.03□□□□□ -2.41
CCDC7-209ENST00000539197 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.41
CCDC7-209ENST00000539197 NWD2Q9ULI1 1742 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
CCDC7-209ENST00000539197 CSMD3Q7Z407 3707 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 SFT2D2O95562 160 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 APOC3P02656 99 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 GNG4P50150 75 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 GNG11P61952 73 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 PPP3R1P63098 170 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 Q8IZM0 81 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 GNG8Q9UK08 70 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 IGSF10Q6WRI0 2623 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 CACNA1CQ13936 2221 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 SPTBN2O15020 2390 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 FAM208BQ5VWN6 2430 aa0.02□□□□□ -2.41
CCDC7-209ENST00000539197 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 HIVEP3Q5T1R4 2406 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 LOC285095A0A1B0GVY8 99 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 S100A3P33764 101 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 WFDC2Q14508 124 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 SVBPQ8N300 66 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 TP53AIP1Q9HCN2 124 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 CDC42SE2Q9NRR3 84 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 ERCC6L2Q5T890 1561 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 LRP6O75581 1613 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 PRDM2Q13029 1718 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 AHCTF1Q8WYP5 2266 aa0.01□□□□□ -2.41
CCDC7-209ENST00000539197 I3L2K1 104 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 IGLC1P0CG04 106 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 LAMC1P11047 1609 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 MYOM2P54296 1465 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 DOCK1Q14185 1865 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 SFTA2Q6UW10 78 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 C10orf71Q711Q0 1435 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 QRICH2Q9H0J4 1663 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 MANBALQ9NQG1 85 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 UQCR10Q9UDW1 63 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 ZNF236Q9UL36 1845 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 ARL2-SNX15V9GYD0 113 aa0□□□□□ -2.41
CCDC7-209ENST00000539197 FXYD6-FXYD2A0A087WZ82 144 aa-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 ATP5EP56381 51 aaPredicted RBP-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 DEFB109BQ30KR1 87 aa-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 TMEM203Q969S6 136 aa-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 NXT2Q9NPJ8 142 aaKnown RBP-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 UBR5O95071 2799 aaPredicted RBP-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 ZNF292O60281 2723 aa-0.01□□□□□ -2.41
CCDC7-209ENST00000539197 ROBO1Q9Y6N7 1651 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 SMG6Q86US8 1419 aaKnown RBP-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 SCAPERQ9BY12 1400 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 C10orf142B7Z368 130 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 SNCAP37840 140 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 DCDP81605 110 aaKnown RBP-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 Q0VG73 95 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 FAM223AQ8IWN6 122 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 FAM167A-AS1Q96KT0 104 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 PATJQ8NI35 1801 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 BIVM-ERCC5R4GMW8 1640 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 PI4KAP42356 2102 aa-0.02□□□□□ -2.41
CCDC7-209ENST00000539197 NSD3Q9BZ95 1437 aa-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 TRBV6-1A0A0K0K1D8 114 aa-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 MGPP08493 103 aa-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 SPRR1AP35321 89 aa-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 UBA52P62987 128 aaKnown RBP-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 MRPS10P82664 201 aaKnown RBP-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 Q5VSD8 79 aa-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 TMEM263Q8WUH6 116 aaKnown RBP-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 SPRR4Q96PI1 79 aa-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 RIMS1Q86UR5 1692 aaKnown RBP-0.03□□□□□ -2.41
CCDC7-209ENST00000539197 CACNA1AO00555 2505 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 C2CD3Q4AC94 2353 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 AKAP6Q13023 2319 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 PTPRQQ9UMZ3 2332 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 NHSL1Q5SYE7 1610 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 UBE2D3P61077 147 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 UBE2D2P62837 147 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 PIGYQ3MUY2 71 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 C10orf113Q5VZT2 155 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 FAIMQ9NVQ4 179 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 PZPP20742 1482 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 SHANK2Q9UPX8 1470 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 LRRC37A2A6NM11 1700 aa-0.04□□□□□ -2.42
CCDC7-209ENST00000539197 C20orf202A1L168 122 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 NAP1L6A6NFF2 107 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 TRAPPC2P0DI81 140 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 TRAPPC2BP0DI82 140 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 GTF2H5Q6ZYL4 71 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 PRO1854Q9UHT4 67 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 WNK2Q9Y3S1 2297 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 NALCNQ8IZF0 1738 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 MYH7P12883 1935 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 KIF21AQ7Z4S6 1674 aa-0.05□□□□□ -2.42
CCDC7-209ENST00000539197 ABCA2Q9BZC7 2435 aa-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 MYH9P35579 1960 aaKnown RBP-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 HMGXB3Q12766 1538 aa-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 HSD52Q0P140 79 aa-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 WHAMMP3Q1A5X7 153 aa-0.06□□□□□ -2.42
CCDC7-209ENST00000539197 FDCSPQ8NFU4 85 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms