RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 LOC100131303A0A0U1RQF7 123 aa14.6□□□□□ -0.07
SMPDL3A-203ENST00000539041 CCL25O15444 150 aa14.6□□□□□ -0.07
SMPDL3A-203ENST00000539041 APOC4P55056 127 aa14.6□□□□□ -0.07
SMPDL3A-203ENST00000539041 SMAGPQ0VAQ4 97 aa14.6□□□□□ -0.07
SMPDL3A-203ENST00000539041 NHP2Q9NX24 153 aaKnown RBP14.6□□□□□ -0.07
SMPDL3A-203ENST00000539041 WIPF1O43516 503 aa14.6□□□□□ -0.07
SMPDL3A-203ENST00000539041 A0A0J9YY99 117 aa14.59□□□□□ -0.07
SMPDL3A-203ENST00000539041 LINC00694P0DN24 101 aa14.59□□□□□ -0.07
SMPDL3A-203ENST00000539041 UBE2D1P51668 147 aa14.59□□□□□ -0.07
SMPDL3A-203ENST00000539041 AMMECR1LQ6DCA0 310 aa14.59□□□□□ -0.07
SMPDL3A-203ENST00000539041 CSDC2Q9Y534 153 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-203ENST00000539041 H3BUT2 72 aa14.58□□□□□ -0.08
SMPDL3A-203ENST00000539041 TEP1Q99973 2627 aaKnown RBP14.58□□□□□ -0.08
SMPDL3A-203ENST00000539041 IGHV3-64A0A075B6Q5 118 aa14.57□□□□□ -0.08
SMPDL3A-203ENST00000539041 DEFB130BP0DP73 79 aa14.57□□□□□ -0.08
SMPDL3A-203ENST00000539041 DEFB130AP0DP74 79 aa14.57□□□□□ -0.08
SMPDL3A-203ENST00000539041 TMEM243Q9BU79 118 aa14.57□□□□□ -0.08
SMPDL3A-203ENST00000539041 F8P00451 2351 aa14.57□□□□□ -0.08
SMPDL3A-203ENST00000539041 SPANXB1Q9NS25 103 aaPredicted RBP14.57□□□□□ -0.08
SMPDL3A-203ENST00000539041 SRSF9Q13242 221 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMPDL3A-203ENST00000539041 DEFB135Q30KP9 77 aa14.56□□□□□ -0.08
SMPDL3A-203ENST00000539041 OR5A1Q8NGJ0 315 aa14.56□□□□□ -0.08
SMPDL3A-203ENST00000539041 GEMIN7Q9H840 131 aaKnown RBP14.56□□□□□ -0.08
SMPDL3A-203ENST00000539041 K7ERJ3 54 aa14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 UBE2L6O14933 153 aa14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 TIRAPP58753 221 aa14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 TENM1Q9UKZ4 2725 aa14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 IGHV3-30-3P0DP02 117 aa14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 C12orf74Q32Q52 190 aa14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 NAA38Q9BRA0 125 aaKnown RBP14.55□□□□□ -0.08
SMPDL3A-203ENST00000539041 IGHV1-58A0A0C4DH39 117 aa14.54□□□□□ -0.08
SMPDL3A-203ENST00000539041 LYRM9A8MSI8 78 aa14.54□□□□□ -0.08
SMPDL3A-203ENST00000539041 H7C423 109 aa14.54□□□□□ -0.08
SMPDL3A-203ENST00000539041 VWFP04275 2813 aa14.53□□□□□ -0.08
SMPDL3A-203ENST00000539041 TRAV8-3A0A0A6YYJ7 113 aa14.52□□□□□ -0.08
SMPDL3A-203ENST00000539041 A0A1B0GWB2 263 aa14.52□□□□□ -0.08
SMPDL3A-203ENST00000539041 KRTAP24-1Q3LI83 254 aa14.52□□□□□ -0.08
SMPDL3A-203ENST00000539041 FAM19A3Q7Z5A8 133 aa14.52□□□□□ -0.08
SMPDL3A-203ENST00000539041 ATRQ13535 2644 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 IGLV5-45A0A087WSX0 123 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 TMEM238LA0A1B0GVL6 79 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 A0A1W2PPM0 123 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 A6NJY4 79 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 FAM222AQ5U5X8 452 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 CDC42SE2Q9NRR3 84 aa14.52□□□□□ -0.09
SMPDL3A-203ENST00000539041 TMEM101Q96IK0 257 aa14.51□□□□□ -0.09
SMPDL3A-203ENST00000539041 SPINK8P0C7L1 97 aa14.5□□□□□ -0.09
SMPDL3A-203ENST00000539041 HERVK_113P63121 156 aa14.5□□□□□ -0.09
SMPDL3A-203ENST00000539041 SAMD5Q5TGI4 173 aa14.5□□□□□ -0.09
SMPDL3A-203ENST00000539041 VSIG2Q96IQ7 327 aa14.5□□□□□ -0.09
SMPDL3A-203ENST00000539041 GAGE10A6NGK3 116 aa14.5□□□□□ -0.09
SMPDL3A-203ENST00000539041 CDKN2A-AS1Q9UH64 79 aa14.5□□□□□ -0.09
SMPDL3A-203ENST00000539041 TRBV6-8A0A0A6YYG3 113 aa14.49□□□□□ -0.09
SMPDL3A-203ENST00000539041 IGHV4-28A0A0C4DH34 117 aa14.49□□□□□ -0.09
SMPDL3A-203ENST00000539041 LINC00242Q5T6M2 205 aa14.49□□□□□ -0.09
SMPDL3A-203ENST00000539041 GTF2H5Q6ZYL4 71 aa14.49□□□□□ -0.09
SMPDL3A-203ENST00000539041 FLNBO75369 2602 aaKnown RBP14.49□□□□□ -0.09
SMPDL3A-203ENST00000539041 IGHV3-30P01768 117 aa14.48□□□□□ -0.09
SMPDL3A-203ENST00000539041 IGHV3-30-5P0DP03 117 aa14.48□□□□□ -0.09
SMPDL3A-203ENST00000539041 IGHV4-30-4P0DP06 118 aa14.48□□□□□ -0.09
SMPDL3A-203ENST00000539041 C10orf126Q8N4M7 172 aa14.48□□□□□ -0.09
SMPDL3A-203ENST00000539041 IGLL5B9A064 214 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 K7EP34 96 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 FABP2P12104 132 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 MIFP14174 115 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 COX6A2Q02221 97 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 PRO0255Q9UI72 69 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 A0A0J9YXY3 114 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 GYPEP15421 78 aa14.47□□□□□ -0.09
SMPDL3A-203ENST00000539041 GAGE6Q13070 117 aa14.46□□□□□ -0.09
SMPDL3A-203ENST00000539041 NDUFA12Q9UI09 145 aa14.46□□□□□ -0.09
SMPDL3A-203ENST00000539041 TRAV13-1A0A0B4J241 112 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 TMEM238C9JI98 176 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 DEFB4AO15263 64 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 Q8NAQ8 132 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 ATP6V0E2Q8NHE4 81 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 RNF183Q96D59 192 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 SPCS1Q9Y6A9 102 aa14.45□□□□□ -0.1
SMPDL3A-203ENST00000539041 ZFAND6Q6FIF0 208 aa14.44□□□□□ -0.1
SMPDL3A-203ENST00000539041 CHCHD5Q9BSY4 110 aa14.44□□□□□ -0.1
SMPDL3A-203ENST00000539041 A8MZ25 164 aa14.43□□□□□ -0.1
SMPDL3A-203ENST00000539041 DAD1P61803 113 aa14.43□□□□□ -0.1
SMPDL3A-203ENST00000539041 C3orf56Q8N813 242 aa14.42□□□□□ -0.1
SMPDL3A-203ENST00000539041 IGLV5-39A0A0G2JS06 123 aa14.42□□□□□ -0.1
SMPDL3A-203ENST00000539041 PAX4O43316 350 aa14.42□□□□□ -0.1
SMPDL3A-203ENST00000539041 OXLD1Q5BKU9 147 aa14.42□□□□□ -0.1
SMPDL3A-203ENST00000539041 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
SMPDL3A-203ENST00000539041 CELA1Q9UNI1 258 aa14.4□□□□□ -0.1
SMPDL3A-203ENST00000539041 APOMO95445 188 aa14.39□□□□□ -0.11
SMPDL3A-203ENST00000539041 IGLV4-60A0A075B6I1 120 aa14.39□□□□□ -0.11
SMPDL3A-203ENST00000539041 SMIM1B2RUZ4 78 aa14.39□□□□□ -0.11
SMPDL3A-203ENST00000539041 NDUFA1O15239 70 aa14.39□□□□□ -0.11
SMPDL3A-203ENST00000539041 LITAFQ99732 161 aa14.39□□□□□ -0.11
SMPDL3A-203ENST00000539041 SPART-AS1P0CW21 52 aa14.38□□□□□ -0.11
SMPDL3A-203ENST00000539041 KRTAP10-11P60412 298 aa14.38□□□□□ -0.11
SMPDL3A-203ENST00000539041 RPL24P83731 157 aaKnown RBP14.38□□□□□ -0.11
SMPDL3A-203ENST00000539041 MUSTN1Q8IVN3 82 aa14.38□□□□□ -0.11
SMPDL3A-203ENST00000539041 PGPEP1Q9NXJ5 209 aa14.38□□□□□ -0.11
SMPDL3A-203ENST00000539041 ATP5G1P05496 136 aa14.37□□□□□ -0.11
SMPDL3A-203ENST00000539041 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms