RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.72
CDCA3-207ENST00000538862 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
CDCA3-207ENST00000538862 SMIM20Q8N5G0 67 aa10.58□□□□□ -0.72
CDCA3-207ENST00000538862 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
CDCA3-207ENST00000538862 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
CDCA3-207ENST00000538862 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
CDCA3-207ENST00000538862 CD28P10747 220 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 PROK1P58294 105 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 Q6ZSV7 163 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 RNF183Q96D59 192 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 MAP6D1Q9H9H5 199 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 PKD1L1Q8TDX9 2849 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 SMCPP49901 116 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-207ENST00000538862 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
CDCA3-207ENST00000538862 NACAE9PAV3 2078 aa10.55□□□□□ -0.72
CDCA3-207ENST00000538862 C1QTNF4Q9BXJ3 329 aa10.55□□□□□ -0.72
CDCA3-207ENST00000538862 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 NDUFA7O95182 113 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 DEFB114Q30KQ6 69 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 BEAN1Q3B7T3 259 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 LINC01006Q8NI28 216 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 DYNLRB2Q8TF09 96 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 TCL1BO95988 128 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 IGHV3-30-3P0DP02 117 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 FOXI1Q12951 378 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 LINC01587Q99440 93 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 CHCHD7Q9BUK0 85 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 TIMM21Q9BVV7 248 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 MGAM2Q2M2H8 2515 aa10.54□□□□□ -0.72
CDCA3-207ENST00000538862 WNK1Q9H4A3 2382 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 IGHV3-64A0A075B6Q5 118 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
CDCA3-207ENST00000538862 INSP01308 110 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 IGHV3-53P01767 116 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 KRTAP10-3P60369 221 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 Q6ZSN1 163 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 SBSPONQ8IVN8 264 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 ANAPC13Q9BS18 74 aa10.53□□□□□ -0.72
CDCA3-207ENST00000538862 A0A0J9YXY3 114 aa10.52□□□□□ -0.72
CDCA3-207ENST00000538862 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.72
CDCA3-207ENST00000538862 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.72
CDCA3-207ENST00000538862 TMEM263Q8WUH6 116 aaKnown RBP10.52□□□□□ -0.72
CDCA3-207ENST00000538862 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.72
CDCA3-207ENST00000538862 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
CDCA3-207ENST00000538862 RS1O15537 224 aa10.52□□□□□ -0.73
CDCA3-207ENST00000538862 IGHV3-33P01772 117 aa10.52□□□□□ -0.73
CDCA3-207ENST00000538862 PRM2P04554 102 aa10.52□□□□□ -0.73
CDCA3-207ENST00000538862 INSL3P51460 131 aa10.52□□□□□ -0.73
CDCA3-207ENST00000538862 VWFP04275 2813 aa10.51□□□□□ -0.73
CDCA3-207ENST00000538862 SCGB1C2P0DMR2 95 aa10.51□□□□□ -0.73
CDCA3-207ENST00000538862 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
CDCA3-207ENST00000538862 HIST2H2BDQ6DRA6 164 aa10.51□□□□□ -0.73
CDCA3-207ENST00000538862 CEMP1Q6PRD7 247 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-207ENST00000538862 Q9UF83 564 aa10.5□□□□□ -0.73
CDCA3-207ENST00000538862 CMYA5Q8N3K9 4069 aa10.5□□□□□ -0.73
CDCA3-207ENST00000538862 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
CDCA3-207ENST00000538862 TEN1Q86WV5 123 aa10.5□□□□□ -0.73
CDCA3-207ENST00000538862 C16orf95Q9H693 158 aa10.5□□□□□ -0.73
CDCA3-207ENST00000538862 B5MCH6 92 aa10.49□□□□□ -0.73
CDCA3-207ENST00000538862 VSIG2Q96IQ7 327 aa10.49□□□□□ -0.73
CDCA3-207ENST00000538862 LITAFQ99732 161 aa10.49□□□□□ -0.73
CDCA3-207ENST00000538862 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 PPDPFLQ8WWR9 84 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 SPANXCQ9NY87 97 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 M0QXV9 152 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
CDCA3-207ENST00000538862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-207ENST00000538862 IGKV2-29A2NJV5 120 aaPredicted RBP10.47□□□□□ -0.73
CDCA3-207ENST00000538862 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
CDCA3-207ENST00000538862 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
CDCA3-207ENST00000538862 TIRAPP58753 221 aa10.46□□□□□ -0.73
CDCA3-207ENST00000538862 ODF3L2Q3SX64 289 aa10.46□□□□□ -0.74
CDCA3-207ENST00000538862 Q6ZUT4 128 aa10.46□□□□□ -0.74
CDCA3-207ENST00000538862 IGLV5-45A0A087WSX0 123 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 ADARB2-AS1A8MUL3 147 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 ZFAND6Q6FIF0 208 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 STHQ8IWL8 128 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 IL17DQ8TAD2 202 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 XCL2Q9UBD3 114 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 IGHV3-38A0A0C4DH36 116 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 TIMM17BO60830 172 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 FHL3Q13643 280 aa10.45□□□□□ -0.74
CDCA3-207ENST00000538862 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 GAGE7O76087 117 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 GAGE12FP0CL80 117 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 GAGE12GP0CL81 117 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 GAGE12IP0CL82 117 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 GAGE4Q13068 117 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 MIAQ16674 131 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 C1orf158Q8N1D5 194 aa10.44□□□□□ -0.74
CDCA3-207ENST00000538862 SLC25A20O43772 301 aa10.43□□□□□ -0.74
CDCA3-207ENST00000538862 PRSS2P07478 247 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms