RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 PIK3CD-AS1Q5SR53 167 aa6.55□□□□□ -1.36
SNHG1-209ENST00000538654 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
SNHG1-209ENST00000538654 SPATA3Q8NHX4 192 aa6.55□□□□□ -1.36
SNHG1-209ENST00000538654 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
SNHG1-209ENST00000538654 BOD1L1Q8NFC6 3051 aa6.55□□□□□ -1.36
SNHG1-209ENST00000538654 TMEM258P61165 79 aa6.54□□□□□ -1.36
SNHG1-209ENST00000538654 SPINK13Q1W4C9 94 aa6.54□□□□□ -1.36
SNHG1-209ENST00000538654 SPTBN2O15020 2390 aa6.54□□□□□ -1.36
SNHG1-209ENST00000538654 IGLV5-39A0A0G2JS06 123 aa6.54□□□□□ -1.36
SNHG1-209ENST00000538654 IGKV3-20P01619 116 aa6.54□□□□□ -1.36
SNHG1-209ENST00000538654 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
SNHG1-209ENST00000538654 ANKHD1Q8IWZ3 2542 aaKnown RBP6.54□□□□□ -1.36
SNHG1-209ENST00000538654 DNAL4O96015 105 aa6.53□□□□□ -1.36
SNHG1-209ENST00000538654 IGLV1-40P01703 118 aa6.53□□□□□ -1.36
SNHG1-209ENST00000538654 DEFB123Q8N688 67 aa6.53□□□□□ -1.36
SNHG1-209ENST00000538654 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-209ENST00000538654 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 IGKV2-29A2NJV5 120 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-209ENST00000538654 K7EQG2 157 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 LMO4P61968 165 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 MRPL55Q7Z7F7 128 aaKnown RBP6.52□□□□□ -1.37
SNHG1-209ENST00000538654 PRIMA1Q86XR5 153 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-209ENST00000538654 CACNA1BQ00975 2339 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 ADGRG4Q8IZF6 3080 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 CCL21O00585 134 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 Q6JHZ5 121 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 LINC00467Q9BRT7 94 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 ESM1Q9NQ30 184 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 IGHV3OR16-10A0A075B7F0 116 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 IGHV3-73A0A0B4J1V6 119 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 Q8N2B8 174 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 SERP2Q8N6R1 65 aa6.52□□□□□ -1.37
SNHG1-209ENST00000538654 CACNA1HO95180 2353 aa6.51□□□□□ -1.37
SNHG1-209ENST00000538654 hADV29S1A0JD25 119 aa6.51□□□□□ -1.37
SNHG1-209ENST00000538654 RPL28P46779 137 aaKnown RBP6.51□□□□□ -1.37
SNHG1-209ENST00000538654 FAM19A3Q7Z5A8 133 aa6.51□□□□□ -1.37
SNHG1-209ENST00000538654 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
SNHG1-209ENST00000538654 MED13LQ71F56 2210 aa6.51□□□□□ -1.37
SNHG1-209ENST00000538654 SOSTDC1Q6X4U4 206 aa6.5□□□□□ -1.37
SNHG1-209ENST00000538654 A6NDX4 124 aa6.5□□□□□ -1.37
SNHG1-209ENST00000538654 PROK1P58294 105 aa6.5□□□□□ -1.37
SNHG1-209ENST00000538654 FAM218AQ96MZ4 157 aa6.5□□□□□ -1.37
SNHG1-209ENST00000538654 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 CRPP02741 224 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 CFHR3Q02985 330 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 LINC00482Q8N8I6 264 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 ZNF625Q96I27 306 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-209ENST00000538654 SMIM1B2RUZ4 78 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 LY6EQ16553 131 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 DPH3Q96FX2 82 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 BPESC1Q9GZL8 116 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 ACACAQ13085 2346 aa6.49□□□□□ -1.37
SNHG1-209ENST00000538654 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 RBMY1BA6NDE4 496 aaKnown RBP6.48□□□□□ -1.37
SNHG1-209ENST00000538654 RBMY1EA6NEQ0 496 aaKnown RBP6.48□□□□□ -1.37
SNHG1-209ENST00000538654 H0YGX0 51 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 RBMY1DP0C7P1 496 aaKnown RBP6.48□□□□□ -1.37
SNHG1-209ENST00000538654 RBMY1A1P0DJD3 496 aaKnown RBP6.48□□□□□ -1.37
SNHG1-209ENST00000538654 COX6A2Q02221 97 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 Q75L30 129 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-209ENST00000538654 ASPMQ8IZT6 3477 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 H3BUX3 64 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 OTOGLQ3ZCN5 2332 aa6.48□□□□□ -1.37
SNHG1-209ENST00000538654 HTN1P15515 57 aa6.47□□□□□ -1.37
SNHG1-209ENST00000538654 BRD3OSQ6XYD6 125 aa6.47□□□□□ -1.37
SNHG1-209ENST00000538654 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SNHG1-209ENST00000538654 Q9HAA7 133 aa6.47□□□□□ -1.37
SNHG1-209ENST00000538654 KNCNA6PVL3 124 aa6.47□□□□□ -1.37
SNHG1-209ENST00000538654 NACAE9PAV3 2078 aa6.47□□□□□ -1.37
SNHG1-209ENST00000538654 BLCAPP62952 87 aa6.46□□□□□ -1.37
SNHG1-209ENST00000538654 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.37
SNHG1-209ENST00000538654 Q6ZSN1 163 aa6.46□□□□□ -1.37
SNHG1-209ENST00000538654 UPK3BQ9BT76 320 aa6.46□□□□□ -1.37
SNHG1-209ENST00000538654 FAM30AQ9NZY2 134 aa6.46□□□□□ -1.37
SNHG1-209ENST00000538654 IGHV3-38A0A0C4DH36 116 aa6.46□□□□□ -1.38
SNHG1-209ENST00000538654 CSMD1Q96PZ7 3565 aa6.46□□□□□ -1.38
SNHG1-209ENST00000538654 MGAQ8IWI9 3026 aa6.46□□□□□ -1.38
SNHG1-209ENST00000538654 LRBAP50851 2863 aa6.46□□□□□ -1.38
SNHG1-209ENST00000538654 DCHS2Q6V1P9 2916 aa6.46□□□□□ -1.38
SNHG1-209ENST00000538654 PSMB8P28062 276 aa6.46□□□□□ -1.38
SNHG1-209ENST00000538654 RBMY1FQ15415 496 aaKnown RBP6.46□□□□□ -1.38
SNHG1-209ENST00000538654 ANKRD11Q6UB99 2663 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-209ENST00000538654 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 A8MTW9 85 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 NDUFC2-KCTD14E9PQ53 114 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 SYNJ2BPP57105 145 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 C14orf132Q9NPU4 83 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
SNHG1-209ENST00000538654 DOPEY2Q9Y3R5 2298 aa6.44□□□□□ -1.38
SNHG1-209ENST00000538654 SND1-IT1Q9HBX3 110 aa6.44□□□□□ -1.38
SNHG1-209ENST00000538654 MUC3AQ02505 3323 aa6.44□□□□□ -1.38
SNHG1-209ENST00000538654 NDUFC2O95298 119 aa6.44□□□□□ -1.38
SNHG1-209ENST00000538654 C19orf73Q9NVV2 129 aa6.44□□□□□ -1.38
SNHG1-209ENST00000538654 K7ENP7 123 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms