RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PRO1854Q9UHT4 67 aa17.84■□□□□ 0.45
RAB40C-204ENST00000538492 SMR3AQ99954 134 aa17.84■□□□□ 0.45
RAB40C-204ENST00000538492 GEMIN7Q9H840 131 aaKnown RBP17.84■□□□□ 0.45
RAB40C-204ENST00000538492 FASNP49327 2511 aaKnown RBP17.83■□□□□ 0.45
RAB40C-204ENST00000538492 IGLV1-51P01701 117 aa17.83■□□□□ 0.44
RAB40C-204ENST00000538492 K7EQD1 137 aa17.83■□□□□ 0.44
RAB40C-204ENST00000538492 EIF4EBP3O60516 100 aaPredicted RBP17.83■□□□□ 0.44
RAB40C-204ENST00000538492 VSIG2Q96IQ7 327 aa17.83■□□□□ 0.44
RAB40C-204ENST00000538492 LINC00694P0DN24 101 aa17.82■□□□□ 0.44
RAB40C-204ENST00000538492 ZNF418Q8TF45 676 aaPredicted RBP17.82■□□□□ 0.44
RAB40C-204ENST00000538492 NDUFA12Q9UI09 145 aa17.82■□□□□ 0.44
RAB40C-204ENST00000538492 RPL36AP83881 106 aaKnown RBP17.81■□□□□ 0.44
RAB40C-204ENST00000538492 RPL36ALQ969Q0 106 aaKnown RBP17.81■□□□□ 0.44
RAB40C-204ENST00000538492 CDKN2A-AS1Q9UH64 79 aa17.81■□□□□ 0.44
RAB40C-204ENST00000538492 HILS1P60008 231 aa17.8■□□□□ 0.44
RAB40C-204ENST00000538492 C19orf73Q9NVV2 129 aa17.8■□□□□ 0.44
RAB40C-204ENST00000538492 TRAV4A0A0B4J268 109 aa17.8■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE12JA6NER3 117 aa17.8■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE4Q13068 117 aa17.8■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE5Q13069 117 aa17.8■□□□□ 0.44
RAB40C-204ENST00000538492 H7C2G1 150 aa17.79■□□□□ 0.44
RAB40C-204ENST00000538492 LITAFQ99732 161 aa17.79■□□□□ 0.44
RAB40C-204ENST00000538492 KMT2BQ9UMN6 2715 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-204ENST00000538492 NTM-AS1Q6ZSK4 140 aa17.79■□□□□ 0.44
RAB40C-204ENST00000538492 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.79■□□□□ 0.44
RAB40C-204ENST00000538492 PRSS2P07478 247 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 CMC4P56277 68 aaPredicted RBP17.78■□□□□ 0.44
RAB40C-204ENST00000538492 HIVEP2P31629 2446 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE7O76087 117 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 NDUFA7O95182 113 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 TCL1BO95988 128 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE12FP0CL80 117 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE12GP0CL81 117 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 GAGE12IP0CL82 117 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 ADAMTSL4-AS1Q5T5F5 129 aa17.78■□□□□ 0.44
RAB40C-204ENST00000538492 PLAC8L1A1L4L8 177 aa17.77■□□□□ 0.44
RAB40C-204ENST00000538492 TRBV10-1A0A0K0K1A3 114 aa17.77■□□□□ 0.43
RAB40C-204ENST00000538492 COX6A2Q02221 97 aa17.77■□□□□ 0.43
RAB40C-204ENST00000538492 SCGB1C2P0DMR2 95 aa17.76■□□□□ 0.43
RAB40C-204ENST00000538492 SMCPP49901 116 aaPredicted RBP17.76■□□□□ 0.43
RAB40C-204ENST00000538492 TRGV2A0A075B6R0 118 aa17.76■□□□□ 0.43
RAB40C-204ENST00000538492 DAZ2Q13117 558 aaKnown RBP17.76■□□□□ 0.43
RAB40C-204ENST00000538492 LYRM7Q5U5X0 104 aa17.76■□□□□ 0.43
RAB40C-204ENST00000538492 C16orf74Q96GX8 76 aa17.75■□□□□ 0.43
RAB40C-204ENST00000538492 IGHV3-33P01772 117 aa17.75■□□□□ 0.43
RAB40C-204ENST00000538492 NPC2P61916 151 aa17.75■□□□□ 0.43
RAB40C-204ENST00000538492 DAZ4Q86SG3 579 aaKnown RBP17.75■□□□□ 0.43
RAB40C-204ENST00000538492 DAZ3Q9NR90 486 aaKnown RBP17.75■□□□□ 0.43
RAB40C-204ENST00000538492 INSL3P51460 131 aa17.74■□□□□ 0.43
RAB40C-204ENST00000538492 A0A0B4J2C4 111 aa17.73■□□□□ 0.43
RAB40C-204ENST00000538492 CSNK1G2-AS1Q8NCQ2 148 aa17.73■□□□□ 0.43
RAB40C-204ENST00000538492 LOC100131303A0A0U1RQF7 123 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 TIRAPP58753 221 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 ZFAND6Q6FIF0 208 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 TMEM101Q96IK0 257 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 FAM110AQ9BQ89 295 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 ERG28Q9UKR5 140 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 TRAV13-1A0A0B4J241 112 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 LINC00242Q5T6M2 205 aa17.72■□□□□ 0.43
RAB40C-204ENST00000538492 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-204ENST00000538492 IGLV5-45A0A087WSX0 123 aa17.71■□□□□ 0.43
RAB40C-204ENST00000538492 C1QTNF4Q9BXJ3 329 aa17.71■□□□□ 0.43
RAB40C-204ENST00000538492 GCN1Q92616 2671 aaKnown RBP17.7■□□□□ 0.42
RAB40C-204ENST00000538492 KRTAP10-3P60369 221 aa17.7■□□□□ 0.42
RAB40C-204ENST00000538492 Q1RN00 199 aa17.7■□□□□ 0.42
RAB40C-204ENST00000538492 TRBV20-1A0A075B6N2 111 aa17.7■□□□□ 0.42
RAB40C-204ENST00000538492 HECTD1Q9ULT8 2610 aa17.7■□□□□ 0.42
RAB40C-204ENST00000538492 J3QR89 54 aa17.69■□□□□ 0.42
RAB40C-204ENST00000538492 DAND5Q8N907 189 aa17.69■□□□□ 0.42
RAB40C-204ENST00000538492 HERVK_113P63121 156 aa17.68■□□□□ 0.42
RAB40C-204ENST00000538492 MIAQ16674 131 aa17.68■□□□□ 0.42
RAB40C-204ENST00000538492 SBSPONQ8IVN8 264 aa17.68■□□□□ 0.42
RAB40C-204ENST00000538492 SPANXDQ9BXN6 97 aa17.68■□□□□ 0.42
RAB40C-204ENST00000538492 SPANXCQ9NY87 97 aa17.68■□□□□ 0.42
RAB40C-204ENST00000538492 CSDC2Q9Y534 153 aaKnown RBP17.66■□□□□ 0.42
RAB40C-204ENST00000538492 NOTCH2Q04721 2471 aa17.66■□□□□ 0.42
RAB40C-204ENST00000538492 TRGV4A0A0C4DH28 118 aa17.66■□□□□ 0.42
RAB40C-204ENST00000538492 CDC42SE2Q9NRR3 84 aa17.66■□□□□ 0.42
RAB40C-204ENST00000538492 FN1P02751 2386 aaKnown RBP17.66■□□□□ 0.42
RAB40C-204ENST00000538492 PF4P02776 101 aa17.65■□□□□ 0.42
RAB40C-204ENST00000538492 UBE2L6O14933 153 aa17.65■□□□□ 0.42
RAB40C-204ENST00000538492 OVOL2Q9BRP0 275 aa17.65■□□□□ 0.42
RAB40C-204ENST00000538492 ZNF625Q96I27 306 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-204ENST00000538492 NDUFA1O15239 70 aa17.64■□□□□ 0.41
RAB40C-204ENST00000538492 TMEM243Q9BU79 118 aa17.64■□□□□ 0.41
RAB40C-204ENST00000538492 VWFP04275 2813 aa17.63■□□□□ 0.41
RAB40C-204ENST00000538492 FOXI1Q12951 378 aa17.63■□□□□ 0.41
RAB40C-204ENST00000538492 Q9H8V8 135 aa17.63■□□□□ 0.41
RAB40C-204ENST00000538492 IGLV5-39A0A0G2JS06 123 aa17.62■□□□□ 0.41
RAB40C-204ENST00000538492 TRBV6-4A0A1B0GX49 114 aa17.62■□□□□ 0.41
RAB40C-204ENST00000538492 GAGE12HA6NDE8 117 aa17.61■□□□□ 0.41
RAB40C-204ENST00000538492 SMIM1B2RUZ4 78 aa17.61■□□□□ 0.41
RAB40C-204ENST00000538492 GTSF1LQ9H1H1 148 aa17.61■□□□□ 0.41
RAB40C-204ENST00000538492 A0A0U1RRA0 63 aa17.61■□□□□ 0.41
RAB40C-204ENST00000538492 LY6G6DO95868 133 aa17.61■□□□□ 0.41
RAB40C-204ENST00000538492 NBEAL2Q6ZNJ1 2754 aa17.6■□□□□ 0.41
RAB40C-204ENST00000538492 FAM19A3Q7Z5A8 133 aa17.6■□□□□ 0.41
RAB40C-204ENST00000538492 ATP6V0E2Q8NHE4 81 aa17.59■□□□□ 0.41
RAB40C-204ENST00000538492 TRIAP1O43715 76 aa17.59■□□□□ 0.41
RAB40C-204ENST00000538492 FHL2Q14192 279 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms