RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 TMEM78Q5T7P6 136 aa4.85□□□□□ -1.63
CD9-207ENST00000538418 PRR9Q5T870 116 aa4.85□□□□□ -1.63
CD9-207ENST00000538418 DCANP1Q8TF63 244 aa4.85□□□□□ -1.63
CD9-207ENST00000538418 RABAC1Q9UI14 185 aa4.85□□□□□ -1.63
CD9-207ENST00000538418 IGKV3-7A0A075B6H7 116 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 DEFB131BA0A096LNP1 70 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 PIGBOS1A0A0B4J2F0 54 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 MAP1LC3B2A6NCE7 125 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 IFNA17P01571 189 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 SPART-AS1P0CW21 52 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 SPCS2Q15005 226 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 SAMD13Q5VXD3 122 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 IGFL1Q6UW32 110 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 EXOC3-AS1Q8N2X6 119 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 OR5C1Q8NGR4 320 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 MAP1LC3BQ9GZQ8 125 aa4.84□□□□□ -1.63
CD9-207ENST00000538418 C11orf86A6NJI1 115 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 TSTD3H0UI37 97 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 DEFB4AO15263 64 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 LCA10Q71F78 164 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 FAM24BQ8N5W8 94 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 IMMP2LQ96T52 175 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
CD9-207ENST00000538418 C3orf85A0A1B0GTC6 90 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 ZNF73O43830 326 aaPredicted RBP4.82□□□□□ -1.64
CD9-207ENST00000538418 IGKV1-17P01599 117 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 RNASE2P10153 161 aaKnown RBP4.82□□□□□ -1.64
CD9-207ENST00000538418 SSBP1Q04837 148 aaKnown RBP4.82□□□□□ -1.64
CD9-207ENST00000538418 LHFPL1Q86WI0 220 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 TERB2Q8NHR7 220 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 CMTM2Q8TAZ6 248 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 COPZ2Q9P299 210 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 U3KQ87 197 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 PKD1P98161 4303 aa4.82□□□□□ -1.64
CD9-207ENST00000538418 MEIS3P1A6NDR6 274 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 ZNF705FA8MVS1 300 aaPredicted RBP4.81□□□□□ -1.64
CD9-207ENST00000538418 H3BT86 120 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 GNRH2O43555 120 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 CFDP00746 253 aaPredicted RBP4.81□□□□□ -1.64
CD9-207ENST00000538418 IGLC1P0CG04 106 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 ZNF705BP0CI00 300 aaPredicted RBP4.81□□□□□ -1.64
CD9-207ENST00000538418 HLA-DRB4P13762 266 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 SRIP30626 198 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 ETV6P41212 452 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 SURF2Q15527 256 aaPredicted RBP4.81□□□□□ -1.64
CD9-207ENST00000538418 SCGB2B2Q4G0G5 96 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 RNASE10Q5GAN6 216 aaKnown RBP4.81□□□□□ -1.64
CD9-207ENST00000538418 PSMG4Q5JS54 123 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 SLC39A9Q9NUM3 307 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 NAT8Q9UHE5 227 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 HLA-DRB4X5D2U9 266 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 MUC4Q99102 2169 aa4.81□□□□□ -1.64
CD9-207ENST00000538418 A0A087WXM4 84 aa4.8□□□□□ -1.64
CD9-207ENST00000538418 A0A1W2PNM2 257 aa4.8□□□□□ -1.64
CD9-207ENST00000538418 S100A4P26447 101 aaKnown RBP4.8□□□□□ -1.64
CD9-207ENST00000538418 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
CD9-207ENST00000538418 MRPS10P82664 201 aaKnown RBP4.8□□□□□ -1.64
CD9-207ENST00000538418 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
CD9-207ENST00000538418 FOXI2Q6ZQN5 318 aa4.8□□□□□ -1.64
CD9-207ENST00000538418 COMMD3Q9UBI1 195 aa4.8□□□□□ -1.64
CD9-207ENST00000538418 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
CD9-207ENST00000538418 A0A0J9YX75 114 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 SNRPGP15A8MWD9 76 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 NEDD8Q15843 81 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 C1orf134Q5TEV5 83 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 C15orf53Q8NAA6 179 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 TMEM229BQ8NBD8 167 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 RNASE11Q8TAA1 199 aaKnown RBP4.79□□□□□ -1.64
CD9-207ENST00000538418 TP53RKQ96S44 253 aa4.79□□□□□ -1.64
CD9-207ENST00000538418 ZNF471Q9BX82 626 aaPredicted RBP4.79□□□□□ -1.64
CD9-207ENST00000538418 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
CD9-207ENST00000538418 PSG9Q00887 426 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 NMSQ5H8A3 153 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 KTN1-AS1Q86SY8 53 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 SNX29P2Q8IUI4 249 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 UBE2DNLQ8IWF7 75 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
CD9-207ENST00000538418 A0A1W2PRE2 83 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 CEBPZOSA8MTT3 80 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 G3V3Q6 166 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 GABARAPH6UMI1 98 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 CD3DP04234 171 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 SUPT4H1P63272 117 aaKnown RBP4.77□□□□□ -1.65
CD9-207ENST00000538418 S100A12P80511 92 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 RRN3P1Q2M238 152 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 LINC01554Q52M75 96 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 SPINK9Q5DT21 86 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 BPIFA4PQ86YQ2 179 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 NAA60Q9H7X0 242 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 RPRMQ9NS64 109 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 MRPL36Q9P0J6 103 aaKnown RBP4.77□□□□□ -1.65
CD9-207ENST00000538418 ABCA13Q86UQ4 5058 aa4.77□□□□□ -1.65
CD9-207ENST00000538418 C1orf196B1AJZ1 125 aa4.76□□□□□ -1.65
CD9-207ENST00000538418 FAM25AB3EWG3 89 aa4.76□□□□□ -1.65
CD9-207ENST00000538418 FAM25CB3EWG5 89 aa4.76□□□□□ -1.65
CD9-207ENST00000538418 FAM25GB3EWG6 89 aa4.76□□□□□ -1.65
CD9-207ENST00000538418 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms