RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LINC00526Q96FQ7 95 aa13.15□□□□□ -0.3
RAB40C-203ENST00000535977 SETXQ7Z333 2677 aaKnown RBP13.15□□□□□ -0.3
RAB40C-203ENST00000535977 NSUN5P1Q3KNT7 163 aa13.14□□□□□ -0.31
RAB40C-203ENST00000535977 IMUPQ9GZP8 106 aa13.14□□□□□ -0.31
RAB40C-203ENST00000535977 UNC79Q9P2D8 2635 aa13.14□□□□□ -0.31
RAB40C-203ENST00000535977 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
RAB40C-203ENST00000535977 PIK3CD-AS1Q5SR53 167 aa13.13□□□□□ -0.31
RAB40C-203ENST00000535977 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
RAB40C-203ENST00000535977 APCP25054 2843 aa13.12□□□□□ -0.31
RAB40C-203ENST00000535977 A0A1B0GX51 115 aa13.12□□□□□ -0.31
RAB40C-203ENST00000535977 Q6ZSV7 163 aa13.12□□□□□ -0.31
RAB40C-203ENST00000535977 SMCR5Q8TEV8 140 aa13.12□□□□□ -0.31
RAB40C-203ENST00000535977 C4orf3Q8WVX3 66 aa13.12□□□□□ -0.31
RAB40C-203ENST00000535977 A0A0J9YXY3 114 aa13.11□□□□□ -0.31
RAB40C-203ENST00000535977 OPRPNQ99935 248 aaPredicted RBP13.11□□□□□ -0.31
RAB40C-203ENST00000535977 I3L3M4 83 aa13.11□□□□□ -0.31
RAB40C-203ENST00000535977 LST1O00453 97 aa13.11□□□□□ -0.31
RAB40C-203ENST00000535977 COX6CP09669 75 aa13.11□□□□□ -0.31
RAB40C-203ENST00000535977 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
RAB40C-203ENST00000535977 TMEM86BQ8N661 226 aa13.1□□□□□ -0.31
RAB40C-203ENST00000535977 CCDC168Q8NDH2 2452 aa13.1□□□□□ -0.31
RAB40C-203ENST00000535977 ADARB2-AS1A8MUL3 147 aa13.1□□□□□ -0.31
RAB40C-203ENST00000535977 TRAV25A0A0B4J276 109 aa13.09□□□□□ -0.31
RAB40C-203ENST00000535977 WIPF1O43516 503 aa13.09□□□□□ -0.31
RAB40C-203ENST00000535977 PRSS2P07478 247 aa13.09□□□□□ -0.31
RAB40C-203ENST00000535977 SLURP1P55000 103 aa13.09□□□□□ -0.31
RAB40C-203ENST00000535977 DEFB131AP59861 70 aa13.09□□□□□ -0.31
RAB40C-203ENST00000535977 CELSR1Q9NYQ6 3014 aa13.09□□□□□ -0.31
RAB40C-203ENST00000535977 TRAV8-3A0A0A6YYJ7 113 aa13.08□□□□□ -0.32
RAB40C-203ENST00000535977 CR1P17927 2039 aa13.08□□□□□ -0.32
RAB40C-203ENST00000535977 C20orf203Q8NBC4 194 aa13.07□□□□□ -0.32
RAB40C-203ENST00000535977 LITAFQ99732 161 aa13.07□□□□□ -0.32
RAB40C-203ENST00000535977 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
RAB40C-203ENST00000535977 LINC00467Q9BRT7 94 aa13.07□□□□□ -0.32
RAB40C-203ENST00000535977 ANKRD17O75179 2603 aaKnown RBP13.07□□□□□ -0.32
RAB40C-203ENST00000535977 ACYP1P07311 99 aa13.06□□□□□ -0.32
RAB40C-203ENST00000535977 Q96MF0 132 aa13.06□□□□□ -0.32
RAB40C-203ENST00000535977 ZFHX3Q15911 3703 aa13.06□□□□□ -0.32
RAB40C-203ENST00000535977 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
RAB40C-203ENST00000535977 KRTAP10-9P60411 292 aa13.06□□□□□ -0.32
RAB40C-203ENST00000535977 GAGE2AQ6NT46 116 aa13.06□□□□□ -0.32
RAB40C-203ENST00000535977 COX7CP15954 63 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 LINC00643Q86TS7 51 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 OR13C6PQ8NH95 151 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 NPC2P61916 151 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 ZNF415Q09FC8 603 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 ADAMTSL4-AS1Q5T5F5 129 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 DYNLRB2Q8TF09 96 aa13.05□□□□□ -0.32
RAB40C-203ENST00000535977 RPS28P62857 69 aaKnown RBP13.04□□□□□ -0.32
RAB40C-203ENST00000535977 DEFB136Q30KP8 78 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 SPANXDQ9BXN6 97 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 RBMY1A1P0DJD3 496 aaKnown RBP13.04□□□□□ -0.32
RAB40C-203ENST00000535977 RBMY1CP0DJD4 496 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 RBMY1FQ15415 496 aaKnown RBP13.04□□□□□ -0.32
RAB40C-203ENST00000535977 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 TMEM61Q8N0U2 210 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 C2orf48Q96LS8 159 aa13.04□□□□□ -0.32
RAB40C-203ENST00000535977 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
RAB40C-203ENST00000535977 ATP5G1P05496 136 aa13.03□□□□□ -0.32
RAB40C-203ENST00000535977 CRYGAP11844 174 aa13.02□□□□□ -0.33
RAB40C-203ENST00000535977 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.33
RAB40C-203ENST00000535977 IGHV3-30-3P0DP02 117 aa13.01□□□□□ -0.33
RAB40C-203ENST00000535977 MAP6D1Q9H9H5 199 aa13.01□□□□□ -0.33
RAB40C-203ENST00000535977 hADV29S1A0JD25 119 aa13.01□□□□□ -0.33
RAB40C-203ENST00000535977 CYSTM1Q9H1C7 97 aa13.01□□□□□ -0.33
RAB40C-203ENST00000535977 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
RAB40C-203ENST00000535977 HTN1P15515 57 aa13□□□□□ -0.33
RAB40C-203ENST00000535977 C5orf38Q86SI9 138 aa13□□□□□ -0.33
RAB40C-203ENST00000535977 RBMY1BA6NDE4 496 aaKnown RBP12.99□□□□□ -0.33
RAB40C-203ENST00000535977 RBMY1EA6NEQ0 496 aaKnown RBP12.99□□□□□ -0.33
RAB40C-203ENST00000535977 RBMY1DP0C7P1 496 aaKnown RBP12.99□□□□□ -0.33
RAB40C-203ENST00000535977 IGLV4-3A0A075B6K6 122 aa12.99□□□□□ -0.33
RAB40C-203ENST00000535977 SPANXCQ9NY87 97 aa12.99□□□□□ -0.33
RAB40C-203ENST00000535977 INSP01308 110 aa12.98□□□□□ -0.33
RAB40C-203ENST00000535977 MIAQ16674 131 aa12.98□□□□□ -0.33
RAB40C-203ENST00000535977 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
RAB40C-203ENST00000535977 KIR2DL5BQ8NHK3 375 aa12.98□□□□□ -0.33
RAB40C-203ENST00000535977 TIMM21Q9BVV7 248 aa12.97□□□□□ -0.33
RAB40C-203ENST00000535977 CXCL5P42830 114 aa12.97□□□□□ -0.33
RAB40C-203ENST00000535977 BEAN1Q3B7T3 259 aa12.97□□□□□ -0.33
RAB40C-203ENST00000535977 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
RAB40C-203ENST00000535977 SORL1Q92673 2214 aa12.97□□□□□ -0.33
RAB40C-203ENST00000535977 TEX15Q9BXT5 2789 aa12.96□□□□□ -0.33
RAB40C-203ENST00000535977 TRACP01848 142 aa12.95□□□□□ -0.34
RAB40C-203ENST00000535977 C11orf72Q8NBR9 251 aa12.95□□□□□ -0.34
RAB40C-203ENST00000535977 DPH3Q96FX2 82 aa12.95□□□□□ -0.34
RAB40C-203ENST00000535977 NDUFA12Q9UI09 145 aa12.95□□□□□ -0.34
RAB40C-203ENST00000535977 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
RAB40C-203ENST00000535977 CD28P10747 220 aa12.94□□□□□ -0.34
RAB40C-203ENST00000535977 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
RAB40C-203ENST00000535977 OXTP01178 125 aa12.93□□□□□ -0.34
RAB40C-203ENST00000535977 HIST1H4AP62805 103 aaKnown RBP12.93□□□□□ -0.34
RAB40C-203ENST00000535977 MRPS36P82909 103 aaKnown RBP12.93□□□□□ -0.34
RAB40C-203ENST00000535977 A8MZ25 164 aa12.93□□□□□ -0.34
RAB40C-203ENST00000535977 RS1O15537 224 aa12.93□□□□□ -0.34
RAB40C-203ENST00000535977 DAZ2Q13117 558 aaKnown RBP12.93□□□□□ -0.34
RAB40C-203ENST00000535977 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
RAB40C-203ENST00000535977 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
RAB40C-203ENST00000535977 MYO9AB2RTY4 2548 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms