RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ZNF664Q8N3J9 261 aa11.03□□□□□ -0.64
VAMP1-205ENST00000535927 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
VAMP1-205ENST00000535927 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
VAMP1-205ENST00000535927 TRAV8-3A0A0A6YYJ7 113 aa11.02□□□□□ -0.65
VAMP1-205ENST00000535927 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
VAMP1-205ENST00000535927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
VAMP1-205ENST00000535927 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
VAMP1-205ENST00000535927 PDZD11Q5EBL8 140 aa11.02□□□□□ -0.65
VAMP1-205ENST00000535927 Q6ZN92 141 aa11.02□□□□□ -0.65
VAMP1-205ENST00000535927 DEFB104AQ8WTQ1 72 aa11.02□□□□□ -0.65
VAMP1-205ENST00000535927 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
VAMP1-205ENST00000535927 TRAV8-4A0A0B4J246 113 aa11.01□□□□□ -0.65
VAMP1-205ENST00000535927 NBDYA0A0U1RRE5 68 aa11.01□□□□□ -0.65
VAMP1-205ENST00000535927 ANGP03950 147 aaKnown RBP11.01□□□□□ -0.65
VAMP1-205ENST00000535927 LINC00310P59036 64 aa11.01□□□□□ -0.65
VAMP1-205ENST00000535927 PRR34Q9NV39 138 aa11.01□□□□□ -0.65
VAMP1-205ENST00000535927 COX11Q9Y6N1 276 aa11.01□□□□□ -0.65
VAMP1-205ENST00000535927 STARD9Q9P2P6 4700 aa11□□□□□ -0.65
VAMP1-205ENST00000535927 A0A096LNJ9 63 aa11□□□□□ -0.65
VAMP1-205ENST00000535927 LEPROTL1O95214 131 aa11□□□□□ -0.65
VAMP1-205ENST00000535927 MIAQ16674 131 aa11□□□□□ -0.65
VAMP1-205ENST00000535927 RMI2Q96E14 147 aa11□□□□□ -0.65
VAMP1-205ENST00000535927 VCX2Q9H322 139 aa11□□□□□ -0.65
VAMP1-205ENST00000535927 IGHV3-30P01768 117 aa10.99□□□□□ -0.65
VAMP1-205ENST00000535927 IGHV3-33P01772 117 aa10.99□□□□□ -0.65
VAMP1-205ENST00000535927 IGHV3-30-3P0DP02 117 aa10.99□□□□□ -0.65
VAMP1-205ENST00000535927 IGHV3-30-5P0DP03 117 aa10.99□□□□□ -0.65
VAMP1-205ENST00000535927 NFE4Q86UQ8 179 aa10.99□□□□□ -0.65
VAMP1-205ENST00000535927 Q8N976 141 aa10.99□□□□□ -0.65
VAMP1-205ENST00000535927 IGLV4-60A0A075B6I1 120 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 NUPR1O60356 82 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 CRPP02741 224 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 AMELXQ99217 191 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 C2orf88Q9BSF0 95 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 KLK12Q9UKR0 248 aa10.98□□□□□ -0.65
VAMP1-205ENST00000535927 IGLV4-3A0A075B6K6 122 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 SEC11AP67812 179 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 REG3AQ06141 175 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 Q6ZR54 194 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 LINC00269Q8N2A0 174 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 IFI27L1Q96BM0 104 aa10.97□□□□□ -0.65
VAMP1-205ENST00000535927 PMVKQ15126 192 aa10.96□□□□□ -0.65
VAMP1-205ENST00000535927 SS18Q15532 418 aa10.96□□□□□ -0.65
VAMP1-205ENST00000535927 TM2D2Q9BX73 214 aa10.96□□□□□ -0.65
VAMP1-205ENST00000535927 HYDINQ4G0P3 5121 aa10.95□□□□□ -0.66
VAMP1-205ENST00000535927 C5orf52A6NGY3 159 aa10.95□□□□□ -0.66
VAMP1-205ENST00000535927 S100A2P29034 98 aa10.95□□□□□ -0.66
VAMP1-205ENST00000535927 PMCHL1Q16048 86 aa10.95□□□□□ -0.66
VAMP1-205ENST00000535927 PLECQ15149 4684 aaKnown RBP10.95□□□□□ -0.66
VAMP1-205ENST00000535927 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
VAMP1-205ENST00000535927 FAM19A3Q7Z5A8 133 aa10.94□□□□□ -0.66
VAMP1-205ENST00000535927 FAM104AQ969W3 186 aa10.94□□□□□ -0.66
VAMP1-205ENST00000535927 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
VAMP1-205ENST00000535927 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
VAMP1-205ENST00000535927 PRSS1P07477 247 aa10.93□□□□□ -0.66
VAMP1-205ENST00000535927 AKR1D1P51857 326 aa10.93□□□□□ -0.66
VAMP1-205ENST00000535927 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
VAMP1-205ENST00000535927 Q6ZUT4 128 aa10.93□□□□□ -0.66
VAMP1-205ENST00000535927 HIST3H2BBQ8N257 126 aa10.93□□□□□ -0.66
VAMP1-205ENST00000535927 MAP1LC3CQ9BXW4 147 aa10.93□□□□□ -0.66
VAMP1-205ENST00000535927 LINC00959A0A1B0GUT2 108 aa10.92□□□□□ -0.66
VAMP1-205ENST00000535927 SNRPEP62304 92 aaKnown RBP10.92□□□□□ -0.66
VAMP1-205ENST00000535927 SPATA12Q7Z6I5 190 aa10.92□□□□□ -0.66
VAMP1-205ENST00000535927 BAALCQ8WXS3 180 aa10.92□□□□□ -0.66
VAMP1-205ENST00000535927 C1orf43Q9BWL3 253 aa10.92□□□□□ -0.66
VAMP1-205ENST00000535927 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
VAMP1-205ENST00000535927 IFITM10A6NMD0 228 aa10.91□□□□□ -0.66
VAMP1-205ENST00000535927 Q8N3U1 123 aa10.91□□□□□ -0.66
VAMP1-205ENST00000535927 FABP4P15090 132 aa10.9□□□□□ -0.66
VAMP1-205ENST00000535927 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
VAMP1-205ENST00000535927 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 UBE2D1P51668 147 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 HERVK_113P63121 156 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 C1orf134Q5TEV5 83 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 CD164L2Q6UWJ8 174 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 LINC00173Q6ZV60 143 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 C6orf223Q8N319 242 aa10.89□□□□□ -0.67
VAMP1-205ENST00000535927 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
VAMP1-205ENST00000535927 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
VAMP1-205ENST00000535927 PET117Q6UWS5 81 aa10.88□□□□□ -0.67
VAMP1-205ENST00000535927 LINC01561Q8N1V8 128 aa10.88□□□□□ -0.67
VAMP1-205ENST00000535927 KRTAP1-5Q9BYS1 174 aa10.88□□□□□ -0.67
VAMP1-205ENST00000535927 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
VAMP1-205ENST00000535927 HIST1H2BLQ99880 126 aa10.87□□□□□ -0.67
VAMP1-205ENST00000535927 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
VAMP1-205ENST00000535927 SYS1-DBNDD2H3BUS1 97 aa10.86□□□□□ -0.67
VAMP1-205ENST00000535927 GEMIN7Q9H840 131 aaKnown RBP10.86□□□□□ -0.67
VAMP1-205ENST00000535927 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 F8VRH5 84 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 M0R2N4 97 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 IGLC3P0DOY3 106 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 RNASE13Q5GAN3 156 aaKnown RBP10.85□□□□□ -0.67
VAMP1-205ENST00000535927 LINC00242Q5T6M2 205 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 Q9HAA7 133 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
VAMP1-205ENST00000535927 VPS13DQ5THJ4 4388 aa10.85□□□□□ -0.67
VAMP1-205ENST00000535927 ALMS1Q8TCU4 4167 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms