RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
VPS33B-202ENST00000535906 NOP10Q9NPE3 64 aaKnown RBP9.58□□□□□ -0.88
VPS33B-202ENST00000535906 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
VPS33B-202ENST00000535906 INAFM1C9JVW0 142 aa9.58□□□□□ -0.88
VPS33B-202ENST00000535906 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
VPS33B-202ENST00000535906 NSD1Q96L73 2696 aaPredicted RBP9.58□□□□□ -0.88
VPS33B-202ENST00000535906 VWFP04275 2813 aa9.58□□□□□ -0.88
VPS33B-202ENST00000535906 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 CSNK1G2-AS1Q8NCQ2 148 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 PRO1854Q9UHT4 67 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 C2CD3Q4AC94 2353 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 PSMB2P49721 201 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
VPS33B-202ENST00000535906 TMEM238C9JI98 176 aa9.56□□□□□ -0.88
VPS33B-202ENST00000535906 PF4P02776 101 aa9.56□□□□□ -0.88
VPS33B-202ENST00000535906 A4D1N5 150 aa9.56□□□□□ -0.88
VPS33B-202ENST00000535906 DAZ2Q13117 558 aaKnown RBP9.56□□□□□ -0.88
VPS33B-202ENST00000535906 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
VPS33B-202ENST00000535906 TRAV4A0A0B4J268 109 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 TINCRA0A1B0GVN0 87 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 Q6ZUT4 128 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 C16orf74Q96GX8 76 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 C1QTNF4Q9BXJ3 329 aa9.55□□□□□ -0.88
VPS33B-202ENST00000535906 K7EQD1 137 aa9.54□□□□□ -0.88
VPS33B-202ENST00000535906 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
VPS33B-202ENST00000535906 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
VPS33B-202ENST00000535906 HIVEP1P15822 2718 aa9.54□□□□□ -0.88
VPS33B-202ENST00000535906 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
VPS33B-202ENST00000535906 TCL1BO95988 128 aa9.54□□□□□ -0.88
VPS33B-202ENST00000535906 TRAV8-3A0A0A6YYJ7 113 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 GAGE7O76087 117 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 GAGE12FP0CL80 117 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 GAGE12GP0CL81 117 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 GAGE12IP0CL82 117 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 SPATA3Q8NHX4 192 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 TENM1Q9UKZ4 2725 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
VPS33B-202ENST00000535906 RPL36AP83881 106 aaKnown RBP9.53□□□□□ -0.88
VPS33B-202ENST00000535906 RPL36ALQ969Q0 106 aaKnown RBP9.53□□□□□ -0.88
VPS33B-202ENST00000535906 VSIG2Q96IQ7 327 aa9.53□□□□□ -0.88
VPS33B-202ENST00000535906 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
VPS33B-202ENST00000535906 IGHV3-33P01772 117 aa9.52□□□□□ -0.89
VPS33B-202ENST00000535906 LITAFQ99732 161 aa9.52□□□□□ -0.89
VPS33B-202ENST00000535906 TRGV2A0A075B6R0 118 aa9.52□□□□□ -0.89
VPS33B-202ENST00000535906 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
VPS33B-202ENST00000535906 INSL3P51460 131 aa9.52□□□□□ -0.89
VPS33B-202ENST00000535906 NTM-AS1Q6ZSK4 140 aa9.52□□□□□ -0.89
VPS33B-202ENST00000535906 GAGE12JA6NER3 117 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 SCGB1C2P0DMR2 95 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 GAGE4Q13068 117 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 GAGE5Q13069 117 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 SPATA25Q9BR10 227 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 FOXI1Q12951 378 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
VPS33B-202ENST00000535906 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
VPS33B-202ENST00000535906 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
VPS33B-202ENST00000535906 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
VPS33B-202ENST00000535906 SBSPONQ8IVN8 264 aa9.5□□□□□ -0.89
VPS33B-202ENST00000535906 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
VPS33B-202ENST00000535906 SPANXDQ9BXN6 97 aa9.5□□□□□ -0.89
VPS33B-202ENST00000535906 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
VPS33B-202ENST00000535906 SPANXCQ9NY87 97 aa9.5□□□□□ -0.89
VPS33B-202ENST00000535906 TIRAPP58753 221 aa9.49□□□□□ -0.89
VPS33B-202ENST00000535906 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
VPS33B-202ENST00000535906 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
VPS33B-202ENST00000535906 LOC100131303A0A0U1RQF7 123 aa9.48□□□□□ -0.89
VPS33B-202ENST00000535906 A8MZ25 164 aa9.48□□□□□ -0.89
VPS33B-202ENST00000535906 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
VPS33B-202ENST00000535906 ZFAND6Q6FIF0 208 aa9.48□□□□□ -0.89
VPS33B-202ENST00000535906 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
VPS33B-202ENST00000535906 TEN1Q86WV5 123 aa9.47□□□□□ -0.89
VPS33B-202ENST00000535906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.47□□□□□ -0.89
VPS33B-202ENST00000535906 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
VPS33B-202ENST00000535906 CDKN2A-AS1Q9UH64 79 aa9.47□□□□□ -0.89
VPS33B-202ENST00000535906 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.89
VPS33B-202ENST00000535906 H7C2G1 150 aa9.46□□□□□ -0.89
VPS33B-202ENST00000535906 PRSS2P07478 247 aa9.46□□□□□ -0.89
VPS33B-202ENST00000535906 MIAQ16674 131 aa9.46□□□□□ -0.89
VPS33B-202ENST00000535906 TRGV4A0A0C4DH28 118 aa9.46□□□□□ -0.9
VPS33B-202ENST00000535906 CRLF1O75462 422 aa9.46□□□□□ -0.9
VPS33B-202ENST00000535906 COX6A2Q02221 97 aa9.46□□□□□ -0.9
VPS33B-202ENST00000535906 FHL2Q14192 279 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 Q1RN00 199 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
VPS33B-202ENST00000535906 ATRQ13535 2644 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 TIMM17BO60830 172 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 FAM19A3Q7Z5A8 133 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
VPS33B-202ENST00000535906 TRRAPQ9Y4A5 3859 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms