RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 CACNG7P62955 275 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
ATM-224ENST00000534625 LITAFQ99732 161 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
ATM-224ENST00000534625 TRAV8-4A0A0B4J246 113 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 H7C1H1 209 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 IFNA1P01562 189 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 P01737 135 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 NTF3P20783 257 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 GNG4P50150 75 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 SULT1A2P50226 295 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 CNBPP62633 177 aaKnown RBP3.28□□□□□ -1.88
ATM-224ENST00000534625 MEF2BQ02080 365 aaPredicted RBP3.28□□□□□ -1.88
ATM-224ENST00000534625 REG3AQ06141 175 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 RASL11AQ6T310 242 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 C9orf62Q8N4C0 152 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 SMIM12Q96EX1 92 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 PGLYRP4Q96LB8 373 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 TMEM243Q9BU79 118 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 NIT2Q9NQR4 276 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
ATM-224ENST00000534625 XKRY2A2RUG3 117 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 PDE6DO43924 150 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 TRGC1P0CF51 173 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 BCL2P10415 239 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 CTRLP40313 264 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 CNFNQ9BYD5 112 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 DPH3P1Q9H4G8 78 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 BIN3Q9NQY0 253 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 MED9Q9NWA0 146 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 TNXBP22105 4242 aa3.27□□□□□ -1.89
ATM-224ENST00000534625 TRAV26-2A0A0B4J265 109 aa3.26□□□□□ -1.89
ATM-224ENST00000534625 TEX46H3BTG2 121 aa3.26□□□□□ -1.89
ATM-224ENST00000534625 K7EN84 100 aa3.26□□□□□ -1.89
ATM-224ENST00000534625 CHTF8P0CG12 524 aa3.26□□□□□ -1.89
ATM-224ENST00000534625 FOXA3P55318 350 aaPredicted RBP3.26□□□□□ -1.89
ATM-224ENST00000534625 COTL1Q14019 142 aa3.26□□□□□ -1.89
ATM-224ENST00000534625 EIF5AL1Q6IS14 154 aaKnown RBP3.26□□□□□ -1.89
ATM-224ENST00000534625 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
ATM-224ENST00000534625 RNASE7Q9H1E1 156 aaKnown RBP3.26□□□□□ -1.89
ATM-224ENST00000534625 IGHV3-64A0A075B6Q5 118 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.25□□□□□ -1.89
ATM-224ENST00000534625 UBE2L6O14933 153 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 Q6ZRU5 148 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 SLC51BQ86UW2 128 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 TCTE3Q8IZS6 198 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 C15orf56Q8N910 161 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 SPACA4Q8TDM5 124 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 GTSF1Q8WW33 167 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
ATM-224ENST00000534625 RNF185Q96GF1 192 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 RPP21Q9H633 154 aaKnown RBP3.25□□□□□ -1.89
ATM-224ENST00000534625 PLAC8Q9NZF1 115 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
ATM-224ENST00000534625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.24□□□□□ -1.89
ATM-224ENST00000534625 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 IGKV2-29A2NJV5 120 aaPredicted RBP3.24□□□□□ -1.89
ATM-224ENST00000534625 FAM231BA6NCW3 169 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 NCR2O95944 276 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 TAGLN2P37802 199 aaKnown RBP3.24□□□□□ -1.89
ATM-224ENST00000534625 RPS10P46783 165 aaKnown RBP3.24□□□□□ -1.89
ATM-224ENST00000534625 COX6A2Q02221 97 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 HIGD2BQ4VC39 106 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 CFAP161Q6P656 301 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 CHCHD10Q8WYQ3 142 aaPredicted RBP3.24□□□□□ -1.89
ATM-224ENST00000534625 DPH3Q96FX2 82 aa3.24□□□□□ -1.89
ATM-224ENST00000534625 GVQW2A0A096LPI5 108 aaPredicted RBP3.23□□□□□ -1.89
ATM-224ENST00000534625 TRBV6-5A0A0K0K1A5 114 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 SDHAF1A6NFY7 115 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 A8MWL6 223 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 TMEM250H0YL14 139 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 H7C423 109 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 PHOX2AO14813 284 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 GATCO43716 136 aaKnown RBP3.23□□□□□ -1.89
ATM-224ENST00000534625 NDUFS6O75380 124 aaKnown RBP3.23□□□□□ -1.89
ATM-224ENST00000534625 FGF6P10767 208 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 ESDP10768 282 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 RNASEKQ6P5S7 137 aaKnown RBP3.23□□□□□ -1.89
ATM-224ENST00000534625 TEX261Q6UWH6 196 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 FAM231DQ6ZW35 169 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 NOTCH2NLQ7Z3S9 236 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 LYPD6BQ8NI32 183 aa3.23□□□□□ -1.89
ATM-224ENST00000534625 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 GAGE10A6NGK3 116 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 I3L3M4 83 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 TSHBP01222 138 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 APCSP02743 223 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 ZNF25P17030 456 aaPredicted RBP3.22□□□□□ -1.89
ATM-224ENST00000534625 PMCHP20382 165 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 XCL1P47992 114 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 POLR2KP53803 58 aaKnown RBP3.22□□□□□ -1.89
ATM-224ENST00000534625 RPL24P83731 157 aaKnown RBP3.22□□□□□ -1.89
ATM-224ENST00000534625 MAJINQ3KP22 176 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 ALKAL2Q6UX46 152 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
ATM-224ENST00000534625 OR5A1Q8NGJ0 315 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms