RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	ZNF295-AS1	Q8N0V1	137 aa		11.62	□□□□□ -0.55
NCAPD3-213	ENST00000534532		A0A0B4J2C4	111 aa		11.61	□□□□□ -0.55
NCAPD3-213	ENST00000534532	UBE2D1	P51668	147 aa		11.61	□□□□□ -0.55
NCAPD3-213	ENST00000534532	C2CD3	Q4AC94	2353 aa		11.61	□□□□□ -0.55
NCAPD3-213	ENST00000534532	IGLV4-3	A0A075B6K6	122 aa		11.61	□□□□□ -0.55
NCAPD3-213	ENST00000534532	FRMD6-AS1	P0C7T7	363 aa		11.61	□□□□□ -0.55
NCAPD3-213	ENST00000534532	FXYD2	P54710	66 aa		11.61	□□□□□ -0.55
NCAPD3-213	ENST00000534532	MUC22	E2RYF6	1773 aa	Predicted RBP	11.6	□□□□□ -0.55
NCAPD3-213	ENST00000534532	MRGPRG-AS1	Q2M3A8	158 aa		11.6	□□□□□ -0.55
NCAPD3-213	ENST00000534532	CD164L2	Q6UWJ8	174 aa		11.6	□□□□□ -0.55
NCAPD3-213	ENST00000534532	CLUHP3	Q96NS8	147 aa		11.6	□□□□□ -0.55
NCAPD3-213	ENST00000534532	C16orf95	Q9H693	158 aa		11.6	□□□□□ -0.55
NCAPD3-213	ENST00000534532		A0A0J9YXY3	114 aa		11.6	□□□□□ -0.55
NCAPD3-213	ENST00000534532	XAGE1A	Q9HD64	81 aa		11.59	□□□□□ -0.55
NCAPD3-213	ENST00000534532	KLLN	B2CW77	178 aa		11.59	□□□□□ -0.55
NCAPD3-213	ENST00000534532	PROK1	P58294	105 aa		11.59	□□□□□ -0.55
NCAPD3-213	ENST00000534532	DCANP1	Q8TF63	244 aa		11.59	□□□□□ -0.55
NCAPD3-213	ENST00000534532	NUP210L	Q5VU65	1888 aa		11.59	□□□□□ -0.55
NCAPD3-213	ENST00000534532	CLEC2B	Q92478	149 aa		11.58	□□□□□ -0.56
NCAPD3-213	ENST00000534532	PCNX3	Q9H6A9	2034 aa		11.58	□□□□□ -0.56
NCAPD3-213	ENST00000534532	IGLV4-69	A0A075B6H9	119 aa		11.58	□□□□□ -0.56
NCAPD3-213	ENST00000534532		H3BT86	120 aa		11.57	□□□□□ -0.56
NCAPD3-213	ENST00000534532	IGLV1-51	P01701	117 aa		11.57	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TRBV6-5	A0A0K0K1A5	114 aa		11.57	□□□□□ -0.56
NCAPD3-213	ENST00000534532	SPATA12	Q7Z6I5	190 aa		11.57	□□□□□ -0.56
NCAPD3-213	ENST00000534532	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.57	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TRBV10-2	A0A0K0K1G8	114 aa		11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532		A0A1W2PPR1	153 aa		11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532	LINC00474	Q9P2X8	69 aa		11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532	C9orf85	Q96MD7	179 aa		11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532	ZNF22	P17026	224 aa	Predicted RBP	11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532	CRIP1	P50238	77 aa		11.56	□□□□□ -0.56
NCAPD3-213	ENST00000534532	IGKV3D-7	A0A0C4DH55	119 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TRBV27	A0A0K0K1C4	114 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	LOC107984640	A0A0U1RRK4	108 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	NPS	P0C0P6	89 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TDRG1	Q3Y452	100 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	PYGO1	Q9Y3Y4	419 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	ODF3L2	Q3SX64	289 aa		11.55	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TEN1	Q86WV5	123 aa		11.54	□□□□□ -0.56
NCAPD3-213	ENST00000534532	ABCA12	Q86UK0	2595 aa		11.54	□□□□□ -0.56
NCAPD3-213	ENST00000534532	RNASE3	P12724	160 aa	Known RBP	11.54	□□□□□ -0.56
NCAPD3-213	ENST00000534532	C14orf132	Q9NPU4	83 aa		11.54	□□□□□ -0.56
NCAPD3-213	ENST00000534532	LOC100131303	A0A0U1RQF7	123 aa		11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	PIK3CD-AS1	Q5SR53	167 aa		11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	ZNF462	Q96JM2	2506 aa		11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	IGKV2D-26	A0A0A0MRZ7	120 aa		11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	CRIP2	P52943	208 aa	Predicted RBP	11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TMEM223	A0PJW6	202 aa		11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	TMEM258	P61165	79 aa		11.53	□□□□□ -0.56
NCAPD3-213	ENST00000534532	DSCAML1	Q8TD84	2053 aa		11.52	□□□□□ -0.57
NCAPD3-213	ENST00000534532	LRRK2	Q5S007	2527 aa		11.52	□□□□□ -0.57
NCAPD3-213	ENST00000534532		U3KQK5	164 aa		11.52	□□□□□ -0.57
NCAPD3-213	ENST00000534532	BPY2	O14599	106 aa		11.51	□□□□□ -0.57
NCAPD3-213	ENST00000534532	LINC00959	A0A1B0GUT2	108 aa		11.51	□□□□□ -0.57
NCAPD3-213	ENST00000534532	WFDC9	Q8NEX5	89 aa		11.51	□□□□□ -0.57
NCAPD3-213	ENST00000534532	ZNF580	Q9UK33	172 aa		11.51	□□□□□ -0.57
NCAPD3-213	ENST00000534532	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.51	□□□□□ -0.57
NCAPD3-213	ENST00000534532	RETN	Q9HD89	108 aa		11.51	□□□□□ -0.57
NCAPD3-213	ENST00000534532	COL5A1	P20908	1838 aa	Predicted RBP	11.5	□□□□□ -0.57
NCAPD3-213	ENST00000534532	PRR9	Q5T870	116 aa		11.5	□□□□□ -0.57
NCAPD3-213	ENST00000534532	IGKV4-1	P06312	121 aa		11.5	□□□□□ -0.57
NCAPD3-213	ENST00000534532	IGLV2-11	P01706	119 aa		11.5	□□□□□ -0.57
NCAPD3-213	ENST00000534532	LRP4	O75096	1905 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	PLXNB1	O43157	2135 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	LINC00308	Q8TCZ7	52 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	RNF185	Q96GF1	192 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	CHCHD7	Q9BUK0	85 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532		M0R378	163 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	UBE2D4	Q9Y2X8	147 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	TSHB	P01222	138 aa		11.49	□□□□□ -0.57
NCAPD3-213	ENST00000534532	UPK3B	Q9BT76	320 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	PRM2	P04554	102 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	SMIM20	Q8N5G0	67 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	CEP295	Q9C0D2	2601 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	IGKV2-28	A0A075B6P5	120 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	IGKV2D-28	P01615	120 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	UBE2D3	P61077	147 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	UBE2D2	P62837	147 aa		11.48	□□□□□ -0.57
NCAPD3-213	ENST00000534532	TRAV23DV6	A0A075B6W5	121 aa		11.47	□□□□□ -0.57
NCAPD3-213	ENST00000534532	BRI3	O95415	125 aa		11.47	□□□□□ -0.57
NCAPD3-213	ENST00000534532	ATOX1	O00244	68 aa		11.47	□□□□□ -0.57
NCAPD3-213	ENST00000534532	NHLRC4	P0CG21	123 aa	Predicted RBP	11.47	□□□□□ -0.57
NCAPD3-213	ENST00000534532	LINC00526	Q96FQ7	95 aa		11.47	□□□□□ -0.57
NCAPD3-213	ENST00000534532	MRPS36	P82909	103 aa	Known RBP	11.47	□□□□□ -0.57
NCAPD3-213	ENST00000534532	DHRS4-AS1	Q9P1J3	65 aa		11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	ARHGAP32	A7KAX9	2087 aa		11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	TLN2	Q9Y4G6	2542 aa		11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	USP9X	Q93008	2570 aa	Predicted RBP	11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	CDPF1	Q6NVV7	123 aa		11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	C11orf21	Q9P2W6	132 aa		11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	SS18L2	Q9UHA2	77 aa		11.46	□□□□□ -0.57
NCAPD3-213	ENST00000534532	KIAA1549	Q9HCM3	1950 aa		11.46	□□□□□ -0.58
NCAPD3-213	ENST00000534532	SEC61G	P60059	68 aa		11.46	□□□□□ -0.58
NCAPD3-213	ENST00000534532	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.46	□□□□□ -0.58
NCAPD3-213	ENST00000534532	C6orf99	Q4VX62	202 aa		11.46	□□□□□ -0.58
NCAPD3-213	ENST00000534532	PPDPF	Q9H3Y8	114 aa		11.44	□□□□□ -0.58
NCAPD3-213	ENST00000534532	MUC7	Q8TAX7	377 aa		11.44	□□□□□ -0.58
NCAPD3-213	ENST00000534532	CASC2	Q6XLA1	102 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 1432.4 ms