RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 COX6CP09669 75 aa12.67□□□□□ -0.38
CTSB-232ENST00000534510 NPC2P61916 151 aa12.67□□□□□ -0.38
CTSB-232ENST00000534510 HERVK_113P63121 156 aa12.67□□□□□ -0.38
CTSB-232ENST00000534510 HIST2H2BDQ6DRA6 164 aa12.67□□□□□ -0.38
CTSB-232ENST00000534510 FBN2P35556 2912 aa12.66□□□□□ -0.38
CTSB-232ENST00000534510 CKS1BP61024 79 aa12.66□□□□□ -0.38
CTSB-232ENST00000534510 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.38
CTSB-232ENST00000534510 RPL36AP83881 106 aaKnown RBP12.65□□□□□ -0.38
CTSB-232ENST00000534510 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
CTSB-232ENST00000534510 NTN5Q8WTR8 489 aaPredicted RBP12.65□□□□□ -0.38
CTSB-232ENST00000534510 RPL36ALQ969Q0 106 aaKnown RBP12.65□□□□□ -0.38
CTSB-232ENST00000534510 ZNF462Q96JM2 2506 aa12.65□□□□□ -0.38
CTSB-232ENST00000534510 CREBBPQ92793 2442 aa12.65□□□□□ -0.38
CTSB-232ENST00000534510 K7EQD1 137 aa12.65□□□□□ -0.38
CTSB-232ENST00000534510 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.38
CTSB-232ENST00000534510 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
CTSB-232ENST00000534510 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
CTSB-232ENST00000534510 COX6A2Q02221 97 aa12.64□□□□□ -0.39
CTSB-232ENST00000534510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.64□□□□□ -0.39
CTSB-232ENST00000534510 ZANQ9Y493 2812 aa12.64□□□□□ -0.39
CTSB-232ENST00000534510 FAM208BQ5VWN6 2430 aa12.64□□□□□ -0.39
CTSB-232ENST00000534510 RPL13AP40429 203 aaKnown RBP12.63□□□□□ -0.39
CTSB-232ENST00000534510 LINC00242Q5T6M2 205 aa12.63□□□□□ -0.39
CTSB-232ENST00000534510 CSDC2Q9Y534 153 aaKnown RBP12.63□□□□□ -0.39
CTSB-232ENST00000534510 DAZ2Q13117 558 aaKnown RBP12.63□□□□□ -0.39
CTSB-232ENST00000534510 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
CTSB-232ENST00000534510 KRTAP1-3Q8IUG1 177 aa12.63□□□□□ -0.39
CTSB-232ENST00000534510 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
CTSB-232ENST00000534510 TRAV4A0A0B4J268 109 aa12.62□□□□□ -0.39
CTSB-232ENST00000534510 DNAJC9-AS1A6NH13 148 aa12.62□□□□□ -0.39
CTSB-232ENST00000534510 A0A1W2PRX2 142 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 CCL24O00175 119 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 CSMD2Q7Z408 3487 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 H3BT86 120 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 C2orf82Q6UX34 121 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 Q6ZTI0 123 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 DAND5Q8N907 189 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 UBE2WQ96B02 151 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 Q9H8V8 135 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 POLQO75417 2590 aa12.61□□□□□ -0.39
CTSB-232ENST00000534510 MXRA5Q9NR99 2828 aa12.6□□□□□ -0.39
CTSB-232ENST00000534510 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
CTSB-232ENST00000534510 COPS9Q8WXC6 57 aa12.6□□□□□ -0.39
CTSB-232ENST00000534510 SMIM1B2RUZ4 78 aa12.59□□□□□ -0.39
CTSB-232ENST00000534510 H7C423 109 aa12.59□□□□□ -0.39
CTSB-232ENST00000534510 LST1O00453 97 aa12.59□□□□□ -0.39
CTSB-232ENST00000534510 C11orf44Q8N8P7 122 aa12.59□□□□□ -0.39
CTSB-232ENST00000534510 LINC00308Q8TCZ7 52 aa12.59□□□□□ -0.39
CTSB-232ENST00000534510 LRRK2Q5S007 2527 aa12.59□□□□□ -0.39
CTSB-232ENST00000534510 CLEC2BQ92478 149 aa12.58□□□□□ -0.4
CTSB-232ENST00000534510 TEX49A0A1B0GTD5 131 aa12.58□□□□□ -0.4
CTSB-232ENST00000534510 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
CTSB-232ENST00000534510 TRAV13-1A0A0B4J241 112 aa12.57□□□□□ -0.4
CTSB-232ENST00000534510 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
CTSB-232ENST00000534510 GAGE12JA6NER3 117 aa12.57□□□□□ -0.4
CTSB-232ENST00000534510 GAGE4Q13068 117 aa12.57□□□□□ -0.4
CTSB-232ENST00000534510 GAGE5Q13069 117 aa12.57□□□□□ -0.4
CTSB-232ENST00000534510 CDC42SE2Q9NRR3 84 aa12.56□□□□□ -0.4
CTSB-232ENST00000534510 NDUFA7O95182 113 aa12.56□□□□□ -0.4
CTSB-232ENST00000534510 CITED2Q99967 270 aaPredicted RBP12.56□□□□□ -0.4
CTSB-232ENST00000534510 NOP10Q9NPE3 64 aaKnown RBP12.56□□□□□ -0.4
CTSB-232ENST00000534510 ZNF625Q96I27 306 aaPredicted RBP12.55□□□□□ -0.4
CTSB-232ENST00000534510 CITED1Q99966 193 aa12.55□□□□□ -0.4
CTSB-232ENST00000534510 UBE2L6O14933 153 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 C16orf74Q96GX8 76 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 TMEM243Q9BU79 118 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 PTPN13Q12923 2485 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 F5H768 121 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 HERV-K104P63124 156 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 PRIMA1Q86XR5 153 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
CTSB-232ENST00000534510 SNCGO76070 127 aa12.52□□□□□ -0.4
CTSB-232ENST00000534510 NAV2Q8IVL1 2488 aa12.52□□□□□ -0.41
CTSB-232ENST00000534510 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
CTSB-232ENST00000534510 GIG44P09565 113 aaPredicted RBP12.52□□□□□ -0.41
CTSB-232ENST00000534510 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
CTSB-232ENST00000534510 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
CTSB-232ENST00000534510 PPDPFQ9H3Y8 114 aa12.51□□□□□ -0.41
CTSB-232ENST00000534510 CENPEQ02224 2701 aa12.51□□□□□ -0.41
CTSB-232ENST00000534510 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 WFDC11Q8NEX6 87 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 COX7A2LO14548 114 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 GAGE7O76087 117 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 GAGE12FP0CL80 117 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 GAGE12GP0CL81 117 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 GAGE12IP0CL82 117 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
CTSB-232ENST00000534510 TRBV6-4A0A1B0GX49 114 aa12.49□□□□□ -0.41
CTSB-232ENST00000534510 DEFB121Q5J5C9 76 aa12.49□□□□□ -0.41
CTSB-232ENST00000534510 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
CTSB-232ENST00000534510 RPL35AP18077 110 aaKnown RBP12.48□□□□□ -0.41
CTSB-232ENST00000534510 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
CTSB-232ENST00000534510 GAGE2EQ4V326 116 aa12.48□□□□□ -0.41
CTSB-232ENST00000534510 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
CTSB-232ENST00000534510 GAGE2DQ9UEU5 116 aa12.48□□□□□ -0.41
CTSB-232ENST00000534510 CHD6Q8TD26 2715 aa12.47□□□□□ -0.41
CTSB-232ENST00000534510 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms