RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 USP9XQ93008 2570 aaPredicted RBP3.13□□□□□ -1.91
CTSC-208ENST00000533897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
CTSC-208ENST00000533897 IGKV2-29A2NJV5 120 aaPredicted RBP3.13□□□□□ -1.91
CTSC-208ENST00000533897 TMEM262E9PQX1 116 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 F5H697 171 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 ATP5J2P56134 94 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 LINC00308Q8TCZ7 52 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 NTN5Q8WTR8 489 aaPredicted RBP3.13□□□□□ -1.91
CTSC-208ENST00000533897 APCP25054 2843 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 IGKV3-20P01619 116 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 RNASE13Q5GAN3 156 aaKnown RBP3.12□□□□□ -1.91
CTSC-208ENST00000533897 CACNA1AO00555 2505 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 NDUFV3P56181 108 aaKnown RBP3.12□□□□□ -1.91
CTSC-208ENST00000533897 HIST1H4AP62805 103 aaKnown RBP3.12□□□□□ -1.91
CTSC-208ENST00000533897 FAM218AQ96MZ4 157 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 CDC42SE2Q9NRR3 84 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 IGKV2-28A0A075B6P5 120 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 IGKV2D-28P01615 120 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 ZNF415Q09FC8 603 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 CLEC2BQ92478 149 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 DUX5Q96PT3 197 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 IGHV3-73A0A0B4J1V6 119 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 NDUFA7O95182 113 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 DEFB131AP59861 70 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 DEFB136Q30KP8 78 aa3.12□□□□□ -1.91
CTSC-208ENST00000533897 SCGB1C2P0DMR2 95 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 COL6A6A6NMZ7 2263 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 TPRP12270 2363 aaKnown RBP3.11□□□□□ -1.91
CTSC-208ENST00000533897 LINC00612Q8N6U2 182 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 TRBV10-1A0A0K0K1A3 114 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 COX7A2LO14548 114 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 DAZ2Q13117 558 aaKnown RBP3.11□□□□□ -1.91
CTSC-208ENST00000533897 SS18Q15532 418 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 FAM222AQ5U5X8 452 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 C2orf82Q6UX34 121 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 UBE2WQ96B02 151 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 OVOL2Q9BRP0 275 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 CHD6Q8TD26 2715 aa3.11□□□□□ -1.91
CTSC-208ENST00000533897 KRTAP1-1Q07627 177 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 PKD1L2Q7Z442 2459 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 TRAV8-4A0A0B4J246 113 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 TRAV25A0A0B4J276 109 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 LY6G6DO95868 133 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 C5orf38Q86SI9 138 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 LINC00167Q96N53 147 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 FAM110AQ9BQ89 295 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 SPTAN1Q13813 2472 aaKnown RBP3.1□□□□□ -1.91
CTSC-208ENST00000533897 TRACP01848 142 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 RPL28P46779 137 aaKnown RBP3.1□□□□□ -1.91
CTSC-208ENST00000533897 KRTAP10-9P60411 292 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 HERVK_113P63121 156 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 LRRC75A-AS1Q8N1F1 130 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 DAND5Q8N907 189 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 TNFRSF18Q9Y5U5 241 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 TMEM86BQ8N661 226 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 LINC01587Q99440 93 aa3.1□□□□□ -1.91
CTSC-208ENST00000533897 NF1P21359 2839 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 IGHV3-38A0A0C4DH36 116 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 CCDC179H3BU77 68 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 K7EQD1 137 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 INSP01308 110 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
CTSC-208ENST00000533897 DAZ4Q86SG3 579 aaKnown RBP3.09□□□□□ -1.91
CTSC-208ENST00000533897 DUX3Q96PT4 197 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 DAZ3Q9NR90 486 aaKnown RBP3.09□□□□□ -1.91
CTSC-208ENST00000533897 ANKRD17O75179 2603 aaKnown RBP3.09□□□□□ -1.91
CTSC-208ENST00000533897 HERV-K104P63124 156 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 KHDC1LQ5JSQ8 128 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 LINC00337Q8N6G1 96 aa3.09□□□□□ -1.91
CTSC-208ENST00000533897 IGHV3OR16-9A0A0B4J2B5 98 aa3.09□□□□□ -1.92
CTSC-208ENST00000533897 IMUPQ9GZP8 106 aa3.09□□□□□ -1.92
CTSC-208ENST00000533897 Q9H8V8 135 aa3.09□□□□□ -1.92
CTSC-208ENST00000533897 ESM1Q9NQ30 184 aa3.09□□□□□ -1.92
CTSC-208ENST00000533897 BEX4Q9NWD9 120 aaPredicted RBP3.09□□□□□ -1.92
CTSC-208ENST00000533897 CENPEQ02224 2701 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 GAGE5Q13069 117 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 GAGE6Q13070 117 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 Q6ZTI0 123 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 C15orf53Q8NAA6 179 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 C2orf48Q96LS8 159 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 SPTBN4Q9H254 2564 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 SPTA1P02549 2419 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 NANOS2P60321 138 aaKnown RBP3.08□□□□□ -1.92
CTSC-208ENST00000533897 HIST2H2BDQ6DRA6 164 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 TEX29Q8N6K0 151 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 PEMTQ9UBM1 199 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 CHD8Q9HCK8 2581 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 MAPK1IP1LQ8NDC0 245 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 C16orf95Q9H693 158 aa3.08□□□□□ -1.92
CTSC-208ENST00000533897 LYSTQ99698 3801 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 TRBV6-4A0A1B0GX49 114 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 H7C2G1 150 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 ACYP1P07311 99 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 FHL2Q14192 279 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 BBC3Q96PG8 261 aaPredicted RBP3.07□□□□□ -1.92
CTSC-208ENST00000533897 ANAPC13Q9BS18 74 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 C1orf43Q9BWL3 253 aa3.07□□□□□ -1.92
CTSC-208ENST00000533897 AKAP6Q13023 2319 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms