RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 LEPROTO15243 131 aa20.18■□□□□ 0.82
SAMD1-202ENST00000533683 NHP2Q9NX24 153 aaKnown RBP20.18■□□□□ 0.82
SAMD1-202ENST00000533683 X6R8D5 127 aa20.18■□□□□ 0.82
SAMD1-202ENST00000533683 LOC100131303A0A0U1RQF7 123 aa20.18■□□□□ 0.82
SAMD1-202ENST00000533683 K7ERJ3 54 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 NAA38Q9BRA0 125 aaKnown RBP20.17■□□□□ 0.82
SAMD1-202ENST00000533683 TRRAPQ9Y4A5 3859 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 IGHV3-64A0A075B6Q5 118 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 H3BUT2 72 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 LINC00694P0DN24 101 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 FHL2Q14192 279 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 NBEAL2Q6ZNJ1 2754 aa20.17■□□□□ 0.82
SAMD1-202ENST00000533683 LGALS3P17931 250 aaKnown RBP20.16■□□□□ 0.82
SAMD1-202ENST00000533683 A0A0J9YY99 117 aa20.15■□□□□ 0.82
SAMD1-202ENST00000533683 DGAT2L7PQ6IED9 249 aa20.15■□□□□ 0.82
SAMD1-202ENST00000533683 WFDC9Q8NEX5 89 aa20.15■□□□□ 0.82
SAMD1-202ENST00000533683 TINCRA0A1B0GVN0 87 aa20.15■□□□□ 0.82
SAMD1-202ENST00000533683 KIR2DL5BQ8NHK3 375 aa20.15■□□□□ 0.82
SAMD1-202ENST00000533683 DEFB130BP0DP73 79 aa20.14■□□□□ 0.81
SAMD1-202ENST00000533683 DEFB130AP0DP74 79 aa20.14■□□□□ 0.81
SAMD1-202ENST00000533683 SBSPONQ8IVN8 264 aa20.14■□□□□ 0.81
SAMD1-202ENST00000533683 LINC00612Q8N6U2 182 aa20.13■□□□□ 0.81
SAMD1-202ENST00000533683 SMIM9A6NGZ8 99 aa20.12■□□□□ 0.81
SAMD1-202ENST00000533683 UBE2D1P51668 147 aa20.12■□□□□ 0.81
SAMD1-202ENST00000533683 GTSF1LQ9H1H1 148 aa20.12■□□□□ 0.81
SAMD1-202ENST00000533683 TMEM238LA0A1B0GVL6 79 aa20.11■□□□□ 0.81
SAMD1-202ENST00000533683 SRSF9Q13242 221 aaKnown RBP eCLIP20.11■□□□□ 0.81
SAMD1-202ENST00000533683 C12orf74Q32Q52 190 aa20.1■□□□□ 0.81
SAMD1-202ENST00000533683 CSDC2Q9Y534 153 aaKnown RBP20.1■□□□□ 0.81
SAMD1-202ENST00000533683 OR5A1Q8NGJ0 315 aa20.1■□□□□ 0.81
SAMD1-202ENST00000533683 IGHV3-30-3P0DP02 117 aa20.09■□□□□ 0.81
SAMD1-202ENST00000533683 TRAV8-3A0A0A6YYJ7 113 aa20.08■□□□□ 0.8
SAMD1-202ENST00000533683 DEFB135Q30KP9 77 aa20.08■□□□□ 0.8
SAMD1-202ENST00000533683 A0A1W2PPM0 123 aa20.07■□□□□ 0.8
SAMD1-202ENST00000533683 WIPF1O43516 503 aa20.07■□□□□ 0.8
SAMD1-202ENST00000533683 APOC4P55056 127 aa20.07■□□□□ 0.8
SAMD1-202ENST00000533683 TMEM243Q9BU79 118 aa20.07■□□□□ 0.8
SAMD1-202ENST00000533683 GEMIN7Q9H840 131 aaKnown RBP20.07■□□□□ 0.8
SAMD1-202ENST00000533683 SPANXB1Q9NS25 103 aaPredicted RBP20.07■□□□□ 0.8
SAMD1-202ENST00000533683 IGHV1-58A0A0C4DH39 117 aa20.05■□□□□ 0.8
SAMD1-202ENST00000533683 A0A1B0GWB2 263 aa20.05■□□□□ 0.8
SAMD1-202ENST00000533683 SAMD5Q5TGI4 173 aa20.05■□□□□ 0.8
SAMD1-202ENST00000533683 GAGE10A6NGK3 116 aa20.04■□□□□ 0.8
SAMD1-202ENST00000533683 TIRAPP58753 221 aa20.04■□□□□ 0.8
SAMD1-202ENST00000533683 SPINK8P0C7L1 97 aa20.03■□□□□ 0.8
SAMD1-202ENST00000533683 VSIG2Q96IQ7 327 aa20.03■□□□□ 0.8
SAMD1-202ENST00000533683 CDC42SE2Q9NRR3 84 aa20.03■□□□□ 0.8
SAMD1-202ENST00000533683 CDKN2A-AS1Q9UH64 79 aa20.03■□□□□ 0.8
SAMD1-202ENST00000533683 IGLV5-45A0A087WSX0 123 aa20.02■□□□□ 0.8
SAMD1-202ENST00000533683 UBE2L6O14933 153 aa20.02■□□□□ 0.8
SAMD1-202ENST00000533683 SMAGPQ0VAQ4 97 aa20.02■□□□□ 0.8
SAMD1-202ENST00000533683 C10orf126Q8N4M7 172 aa20.02■□□□□ 0.8
SAMD1-202ENST00000533683 COX6A2Q02221 97 aa20.01■□□□□ 0.79
SAMD1-202ENST00000533683 FAM222AQ5U5X8 452 aa20.01■□□□□ 0.79
SAMD1-202ENST00000533683 IGHV3-30P01768 117 aa20.01■□□□□ 0.79
SAMD1-202ENST00000533683 IGHV3-30-5P0DP03 117 aa20.01■□□□□ 0.79
SAMD1-202ENST00000533683 LINC00242Q5T6M2 205 aa20.01■□□□□ 0.79
SAMD1-202ENST00000533683 IGLL5B9A064 214 aa20■□□□□ 0.79
SAMD1-202ENST00000533683 A6NJY4 79 aa20■□□□□ 0.79
SAMD1-202ENST00000533683 K7EP34 96 aa20■□□□□ 0.79
SAMD1-202ENST00000533683 GTF2H5Q6ZYL4 71 aa20■□□□□ 0.79
SAMD1-202ENST00000533683 A8MZ25 164 aa19.99■□□□□ 0.79
SAMD1-202ENST00000533683 FABP2P12104 132 aa19.99■□□□□ 0.79
SAMD1-202ENST00000533683 KRTAP24-1Q3LI83 254 aa19.99■□□□□ 0.79
SAMD1-202ENST00000533683 FAM19A3Q7Z5A8 133 aa19.99■□□□□ 0.79
SAMD1-202ENST00000533683 LYRM9A8MSI8 78 aa19.98■□□□□ 0.79
SAMD1-202ENST00000533683 DEFB4AO15263 64 aa19.98■□□□□ 0.79
SAMD1-202ENST00000533683 TRBV6-8A0A0A6YYG3 113 aa19.98■□□□□ 0.79
SAMD1-202ENST00000533683 H7C423 109 aa19.98■□□□□ 0.79
SAMD1-202ENST00000533683 TRAV13-1A0A0B4J241 112 aa19.97■□□□□ 0.79
SAMD1-202ENST00000533683 A0A0J9YXY3 114 aa19.97■□□□□ 0.79
SAMD1-202ENST00000533683 HERVK_113P63121 156 aa19.97■□□□□ 0.79
SAMD1-202ENST00000533683 TMEM101Q96IK0 257 aa19.97■□□□□ 0.79
SAMD1-202ENST00000533683 SPCS1Q9Y6A9 102 aa19.97■□□□□ 0.79
SAMD1-202ENST00000533683 IGHV4-28A0A0C4DH34 117 aa19.96■□□□□ 0.79
SAMD1-202ENST00000533683 IGHV4-30-4P0DP06 118 aa19.96■□□□□ 0.79
SAMD1-202ENST00000533683 NDUFA12Q9UI09 145 aa19.95■□□□□ 0.78
SAMD1-202ENST00000533683 GYPEP15421 78 aa19.95■□□□□ 0.78
SAMD1-202ENST00000533683 GAGE6Q13070 117 aa19.94■□□□□ 0.78
SAMD1-202ENST00000533683 PRO0255Q9UI72 69 aa19.94■□□□□ 0.78
SAMD1-202ENST00000533683 FBN1P35555 2871 aaKnown RBP19.92■□□□□ 0.78
SAMD1-202ENST00000533683 OCIAD2Q56VL3 154 aa19.92■□□□□ 0.78
SAMD1-202ENST00000533683 TMEM238C9JI98 176 aa19.91■□□□□ 0.78
SAMD1-202ENST00000533683 ZFAND6Q6FIF0 208 aa19.91■□□□□ 0.78
SAMD1-202ENST00000533683 Q8NAQ8 132 aa19.91■□□□□ 0.78
SAMD1-202ENST00000533683 OXLD1Q5BKU9 147 aa19.91■□□□□ 0.78
SAMD1-202ENST00000533683 ATP6V0E2Q8NHE4 81 aa19.91■□□□□ 0.78
SAMD1-202ENST00000533683 CHCHD5Q9BSY4 110 aa19.91■□□□□ 0.78
SAMD1-202ENST00000533683 LITAFQ99732 161 aa19.9■□□□□ 0.78
SAMD1-202ENST00000533683 APOMO95445 188 aa19.89■□□□□ 0.77
SAMD1-202ENST00000533683 MIFP14174 115 aa19.89■□□□□ 0.77
SAMD1-202ENST00000533683 IGLV5-39A0A0G2JS06 123 aa19.88■□□□□ 0.77
SAMD1-202ENST00000533683 RNF183Q96D59 192 aa19.88■□□□□ 0.77
SAMD1-202ENST00000533683 IGLV4-60A0A075B6I1 120 aa19.88■□□□□ 0.77
SAMD1-202ENST00000533683 PGPEP1Q9NXJ5 209 aa19.88■□□□□ 0.77
SAMD1-202ENST00000533683 CFC1BP0CG36 223 aa19.87■□□□□ 0.77
SAMD1-202ENST00000533683 CFC1P0CG37 223 aa19.87■□□□□ 0.77
SAMD1-202ENST00000533683 MUSTN1Q8IVN3 82 aa19.87■□□□□ 0.77
SAMD1-202ENST00000533683 CELA1Q9UNI1 258 aa19.87■□□□□ 0.77
SAMD1-202ENST00000533683 SMIM1B2RUZ4 78 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms