RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 CITED1Q99966 193 aa5.78□□□□□ -1.48
CTNND1-230ENST00000532245 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 FHL3Q13643 280 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 HELZ2Q9BYK8 2649 aaKnown RBP5.77□□□□□ -1.49
CTNND1-230ENST00000532245 MIAQ16674 131 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 C9orf85Q96MD7 179 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 DSCAML1Q8TD84 2053 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 MRPS12O15235 138 aaKnown RBP5.77□□□□□ -1.49
CTNND1-230ENST00000532245 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 PRO1854Q9UHT4 67 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 H7C423 109 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 RPL32P62910 135 aaKnown RBP5.77□□□□□ -1.49
CTNND1-230ENST00000532245 TDRG1Q3Y452 100 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
CTNND1-230ENST00000532245 IGHV1-58A0A0C4DH39 117 aa5.76□□□□□ -1.49
CTNND1-230ENST00000532245 FAM19A5Q7Z5A7 132 aaPredicted RBP5.76□□□□□ -1.49
CTNND1-230ENST00000532245 TRAV12-1A0A0B4J245 112 aa5.76□□□□□ -1.49
CTNND1-230ENST00000532245 CEND1Q8N111 149 aa5.76□□□□□ -1.49
CTNND1-230ENST00000532245 K7ERJ3 54 aa5.76□□□□□ -1.49
CTNND1-230ENST00000532245 TTTY13Q9BZ97 58 aa5.76□□□□□ -1.49
CTNND1-230ENST00000532245 FSHBP01225 129 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 HIST1H4AP62805 103 aaKnown RBP5.75□□□□□ -1.49
CTNND1-230ENST00000532245 TET2Q6N021 2002 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-230ENST00000532245 TRANK1O15050 2925 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 SYCNQ0VAF6 134 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 C7orf33Q8WU49 177 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 HIGD2AQ9BW72 106 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 IGLC3P0DOY3 106 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 SBSPONQ8IVN8 264 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 CDKN2A-AS1Q9UH64 79 aa5.75□□□□□ -1.49
CTNND1-230ENST00000532245 SOCS3O14543 225 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 XAGE1AQ9HD64 81 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 DSCR8Q96T75 97 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 TINCRA0A1B0GVN0 87 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 C9orf153Q5TBE3 101 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 IGLV4-3A0A075B6K6 122 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 BVES-AS1Q5T3Y7 98 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 UFSP1Q6NVU6 142 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 BEAN1Q3B7T3 259 aa5.74□□□□□ -1.49
CTNND1-230ENST00000532245 RNASE8Q8TDE3 154 aaKnown RBP5.73□□□□□ -1.49
CTNND1-230ENST00000532245 B9D2Q9BPU9 175 aa5.73□□□□□ -1.49
CTNND1-230ENST00000532245 LINC01545Q5VT33 79 aa5.73□□□□□ -1.49
CTNND1-230ENST00000532245 CDH23Q9H251 3354 aa5.73□□□□□ -1.49
CTNND1-230ENST00000532245 IFITM1P13164 125 aa5.73□□□□□ -1.49
CTNND1-230ENST00000532245 UBE2D3P61077 147 aa5.73□□□□□ -1.49
CTNND1-230ENST00000532245 UBE2D2P62837 147 aa5.73□□□□□ -1.49
CTNND1-230ENST00000532245 ODF1Q14990 250 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 A0A096LNT2 108 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 TSHBP01222 138 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 FHL2Q14192 279 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 CELA1Q9UNI1 258 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 C1orf134Q5TEV5 83 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 FAM19A1Q7Z5A9 133 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 UNC80Q8N2C7 3258 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 A4D1N5 150 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 DIRC1Q969H9 104 aa5.72□□□□□ -1.49
CTNND1-230ENST00000532245 A0A096LNI7 61 aa5.71□□□□□ -1.49
CTNND1-230ENST00000532245 TRBV27A0A0K0K1C4 114 aa5.71□□□□□ -1.49
CTNND1-230ENST00000532245 CFC1BP0CG36 223 aa5.71□□□□□ -1.49
CTNND1-230ENST00000532245 CFC1P0CG37 223 aa5.71□□□□□ -1.49
CTNND1-230ENST00000532245 CD164L2Q6UWJ8 174 aa5.71□□□□□ -1.49
CTNND1-230ENST00000532245 LINC00959A0A1B0GUT2 108 aa5.71□□□□□ -1.5
CTNND1-230ENST00000532245 E9PLD3 99 aa5.71□□□□□ -1.5
CTNND1-230ENST00000532245 COL27A1Q8IZC6 1860 aaPredicted RBP5.71□□□□□ -1.5
CTNND1-230ENST00000532245 GAS8-AS1O95177 125 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 ORMDL1Q9P0S3 153 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 hADV29S1A0JD25 119 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 HAMPP81172 84 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 C12orf74Q32Q52 190 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 KRTAP1-3Q8IUG1 177 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 ZNF292O60281 2723 aa5.7□□□□□ -1.5
CTNND1-230ENST00000532245 RBMY1FQ15415 496 aaKnown RBP5.69□□□□□ -1.5
CTNND1-230ENST00000532245 MDFIQ99750 246 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 TRBV20-1A0A075B6N2 111 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 WFDC10BQ8IUB3 73 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 CFAP46Q8IYW2 2715 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 NDUFS5O43920 106 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 Q6ZVH6 145 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 NRACQ8N912 160 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 UBE2D4Q9Y2X8 147 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 A8MZ25 164 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 OCIAD2Q56VL3 154 aa5.69□□□□□ -1.5
CTNND1-230ENST00000532245 ZNF22P17026 224 aaPredicted RBP5.68□□□□□ -1.5
CTNND1-230ENST00000532245 PIK3CD-AS1Q5SR53 167 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 IGLV4-69A0A075B6H9 119 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 IGKV2-28A0A075B6P5 120 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 IGKV2D-28P01615 120 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 INAFM2P0DMQ5 153 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 LYPD5Q6UWN5 251 aa5.68□□□□□ -1.5
CTNND1-230ENST00000532245 LAMA2P24043 3122 aaKnown RBP5.68□□□□□ -1.5
CTNND1-230ENST00000532245 BAALC-AS2P0C853 105 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms