RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 TRBV6-8A0A0A6YYG3 113 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 UBE2L6O14933 153 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 PRSS1P07477 247 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 S100A12P80511 92 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 MRPS36P82909 103 aaKnown RBP6.88□□□□□ -1.31
CTNND1-228ENST00000531007 LINC01545Q5VT33 79 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 Q6ZTC4 211 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
CTNND1-228ENST00000531007 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
CTNND1-228ENST00000531007 LOC100131303A0A0U1RQF7 123 aa6.87□□□□□ -1.31
CTNND1-228ENST00000531007 HTN3P15516 51 aa6.87□□□□□ -1.31
CTNND1-228ENST00000531007 PMVKQ15126 192 aa6.87□□□□□ -1.31
CTNND1-228ENST00000531007 C15orf53Q8NAA6 179 aa6.87□□□□□ -1.31
CTNND1-228ENST00000531007 KRTAP4-2Q9BYR5 136 aa6.87□□□□□ -1.31
CTNND1-228ENST00000531007 A0A087WX48 190 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 PLNP26678 52 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 NANOS2P60321 138 aaKnown RBP6.86□□□□□ -1.31
CTNND1-228ENST00000531007 RPL39P62891 51 aaKnown RBP6.86□□□□□ -1.31
CTNND1-228ENST00000531007 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 NTM-AS1Q6ZSK4 140 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 TMEM101Q96IK0 257 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 C12orf57Q99622 126 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 UBE2D4Q9Y2X8 147 aa6.86□□□□□ -1.31
CTNND1-228ENST00000531007 A0A096LPF7 62 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 A0A0J9YY99 117 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 A0A1B0GUV1 79 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 F8VRH5 84 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 LELP1Q5T871 98 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 BAALCQ8WXS3 180 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 C2orf88Q9BSF0 95 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 VCX2Q9H322 139 aa6.85□□□□□ -1.31
CTNND1-228ENST00000531007 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 HSBP1L1C9JCN9 74 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 FGF6P10767 208 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 SEC11AP67812 179 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 ODF1Q14990 250 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 AMMECR1LQ6DCA0 310 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 Q8N976 141 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 OR5A1Q8NGJ0 315 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 AMELXQ99217 191 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 CST9LQ9H4G1 147 aa6.84□□□□□ -1.31
CTNND1-228ENST00000531007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-228ENST00000531007 TRAV8-6A0A0B4J262 113 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 IGKV2-29A2NJV5 120 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-228ENST00000531007 PRSS29PA6NIE9 313 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 H0Y8G0 127 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 CCL25O15444 150 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 DPM2O94777 84 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 TCTAP57738 103 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
CTNND1-228ENST00000531007 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
CTNND1-228ENST00000531007 TRAV9-2A0A087WT02 112 aa6.82□□□□□ -1.32
CTNND1-228ENST00000531007 IGKCP01834 107 aa6.82□□□□□ -1.32
CTNND1-228ENST00000531007 HUWE1Q7Z6Z7 4374 aaKnown RBP6.81□□□□□ -1.32
CTNND1-228ENST00000531007 LYPD5Q6UWN5 251 aa6.81□□□□□ -1.32
CTNND1-228ENST00000531007 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
CTNND1-228ENST00000531007 NFE4Q86UQ8 179 aa6.81□□□□□ -1.32
CTNND1-228ENST00000531007 ZNF664Q8N3J9 261 aa6.81□□□□□ -1.32
CTNND1-228ENST00000531007 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
CTNND1-228ENST00000531007 MRPL35Q9NZE8 188 aaKnown RBP6.81□□□□□ -1.32
CTNND1-228ENST00000531007 PRKDCP78527 4128 aaKnown RBP6.81□□□□□ -1.32
CTNND1-228ENST00000531007 NUPR2A6NF83 97 aa6.8□□□□□ -1.32
CTNND1-228ENST00000531007 DEFB104AQ8WTQ1 72 aa6.8□□□□□ -1.32
CTNND1-228ENST00000531007 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 TSTD3H0UI37 97 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 IGLC3P0DOY3 106 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 GAGE6Q13070 117 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 KLK5Q9Y337 293 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-228ENST00000531007 DNAH9Q9NYC9 4486 aa6.79□□□□□ -1.32
CTNND1-228ENST00000531007 TENM3Q9P273 2699 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 K7EP13 123 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 UBE2D1P51668 147 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 CCL18P55774 89 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 HERVK_113P61574 105 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 RBX1P62877 108 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-228ENST00000531007 Q6ZUT4 128 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 FAM104AQ969W3 186 aa6.78□□□□□ -1.32
CTNND1-228ENST00000531007 IGLV4-69A0A075B6H9 119 aa6.77□□□□□ -1.33
CTNND1-228ENST00000531007 HERVK_113P63121 156 aa6.77□□□□□ -1.33
CTNND1-228ENST00000531007 SPATA45Q537H7 98 aa6.77□□□□□ -1.33
CTNND1-228ENST00000531007 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-228ENST00000531007 PMCHL2Q9BQD1 86 aa6.77□□□□□ -1.33
CTNND1-228ENST00000531007 GEMIN7Q9H840 131 aaKnown RBP6.77□□□□□ -1.33
CTNND1-228ENST00000531007 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 IGLL5B9A064 214 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 H3BRM9 83 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 ESRGQ1W209 222 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 ZC2HC1BQ5TFG8 222 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 UPK3BQ9BT76 320 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
CTNND1-228ENST00000531007 MRPS16Q9Y3D3 137 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms