RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 SNHG12Q9BXW3 62 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 SPHKAPQ2M3C7 1700 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 ABCA3Q99758 1704 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 KIAA1551Q9HCM1 1747 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 JMJD1CQ15652 2540 aa1.12□□□□□ -2.23
CAPRIN1-208ENST00000530008 TRAV22A0A0B4J277 110 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 ZNF815PA8K554 130 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 APOC3P02656 99 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 GNG2P59768 71 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 PKIAP61925 76 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 MANBALQ9NQG1 85 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 TTC37Q6PGP7 1564 aa1.11□□□□□ -2.23
CAPRIN1-208ENST00000530008 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
CAPRIN1-208ENST00000530008 M0R143 59 aa1.1□□□□□ -2.23
CAPRIN1-208ENST00000530008 S100A10P60903 97 aa1.1□□□□□ -2.23
CAPRIN1-208ENST00000530008 ACBD7Q8N6N7 88 aa1.1□□□□□ -2.23
CAPRIN1-208ENST00000530008 DOCK11Q5JSL3 2073 aa1.1□□□□□ -2.23
CAPRIN1-208ENST00000530008 TCHHQ07283 1943 aa1.09□□□□□ -2.23
CAPRIN1-208ENST00000530008 SFT2D2O95562 160 aa1.09□□□□□ -2.23
CAPRIN1-208ENST00000530008 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
CAPRIN1-208ENST00000530008 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
CAPRIN1-208ENST00000530008 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
CAPRIN1-208ENST00000530008 LINC00472Q9H8W2 130 aa1.09□□□□□ -2.23
CAPRIN1-208ENST00000530008 RB1CC1Q8TDY2 1594 aa1.08□□□□□ -2.24
CAPRIN1-208ENST00000530008 PSME4Q14997 1843 aa1.08□□□□□ -2.24
CAPRIN1-208ENST00000530008 UBE2D3P61077 147 aa1.08□□□□□ -2.24
CAPRIN1-208ENST00000530008 UBE2D2P62837 147 aa1.08□□□□□ -2.24
CAPRIN1-208ENST00000530008 PVALEFA0A1B0GWK0 134 aa1.07□□□□□ -2.24
CAPRIN1-208ENST00000530008 SMR3AQ99954 134 aa1.07□□□□□ -2.24
CAPRIN1-208ENST00000530008 PI4KAP42356 2102 aa1.07□□□□□ -2.24
CAPRIN1-208ENST00000530008 TET3O43151 1660 aa1.07□□□□□ -2.24
CAPRIN1-208ENST00000530008 MYOM1P52179 1685 aa1.07□□□□□ -2.24
CAPRIN1-208ENST00000530008 CHD1O14646 1710 aa1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 MAGI1Q96QZ7 1491 aaPredicted RBP1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 SBF2Q86WG5 1849 aa1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 KRTDAPP60985 99 aa1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 HAMPP81172 84 aa1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 C9orf62Q8N4C0 152 aa1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 NXT2Q9NPJ8 142 aaKnown RBP1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 KDM5AP29375 1690 aaKnown RBP1.06□□□□□ -2.24
CAPRIN1-208ENST00000530008 hADV29S1A0JD25 119 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 CRYM-AS1A6NIL9 109 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 MT-ATP8P03928 68 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 COL5A1-AS1Q5SY13 56 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 SPINK6Q6UWN8 80 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 PRO1854Q9UHT4 67 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 ABCC5O15440 1437 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 ADGRL2O95490 1459 aa1.05□□□□□ -2.24
CAPRIN1-208ENST00000530008 TOPAZ1Q8N9V7 1692 aa1.04□□□□□ -2.24
CAPRIN1-208ENST00000530008 ZNF236Q9UL36 1845 aa1.04□□□□□ -2.24
CAPRIN1-208ENST00000530008 COX6CP09669 75 aa1.04□□□□□ -2.24
CAPRIN1-208ENST00000530008 PRO1933Q9H354 126 aa1.04□□□□□ -2.24
CAPRIN1-208ENST00000530008 ARL2-SNX15V9GYD0 113 aa1.04□□□□□ -2.24
CAPRIN1-208ENST00000530008 KIF21AQ7Z4S6 1674 aa1.04□□□□□ -2.24
CAPRIN1-208ENST00000530008 MON2Q7Z3U7 1717 aa1.03□□□□□ -2.24
CAPRIN1-208ENST00000530008 RGPD4Q7Z3J3 1758 aa1.03□□□□□ -2.24
CAPRIN1-208ENST00000530008 FAIMQ9NVQ4 179 aa1.03□□□□□ -2.24
CAPRIN1-208ENST00000530008 MED14O60244 1454 aa1.03□□□□□ -2.24
CAPRIN1-208ENST00000530008 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.25
CAPRIN1-208ENST00000530008 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 RGPD3A6NKT7 1758 aaPredicted RBP1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 LRRC37A2A6NM11 1700 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 IGLC1P0CG04 106 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 TRAPPC2P0DI81 140 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 TRAPPC2BP0DI82 140 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 UBA52P62987 128 aaKnown RBP1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 ARHGEF5Q12774 1597 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 PDCD11Q14690 1871 aaKnown RBP1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 SFTA2Q6UW10 78 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 MEGF8Q7Z7M0 2845 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 FAM223AQ8IWN6 122 aa1.02□□□□□ -2.25
CAPRIN1-208ENST00000530008 MYH4Q9Y623 1939 aa1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 HMGXB3Q12766 1538 aa1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 TROQ12816 1431 aaPredicted RBP1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 SEC11AP67812 179 aa1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 PYY3Q5JQD4 70 aa1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 Q6JHZ5 121 aa1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 MARF1Q9Y4F3 1742 aaKnown RBP1.01□□□□□ -2.25
CAPRIN1-208ENST00000530008 NAV3Q8IVL0 2385 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 BAZ1AQ9NRL2 1556 aaPredicted RBP1□□□□□ -2.25
CAPRIN1-208ENST00000530008 CADP27708 2225 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 TEX14Q8IWB6 1497 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 SHANK2Q9UPX8 1470 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 FRAS1Q86XX4 4008 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 A0A0D9SFI3 127 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 MGPP08493 103 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 VAMP8Q9BV40 100 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 DPY30Q9C005 99 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 V9GYS6 101 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 PPLO60437 1756 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 UBR1Q8IWV7 1749 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 COL4A6Q14031 1691 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 MYO7BQ6PIF6 2116 aa1□□□□□ -2.25
CAPRIN1-208ENST00000530008 EHBP1L1Q8N3D4 1523 aa0.99□□□□□ -2.25
CAPRIN1-208ENST00000530008 PLEKHH2Q8IVE3 1493 aa0.99□□□□□ -2.25
CAPRIN1-208ENST00000530008 ARHGAP35Q9NRY4 1499 aa0.99□□□□□ -2.25
CAPRIN1-208ENST00000530008 LRRIQ1Q96JM4 1722 aa0.99□□□□□ -2.25
CAPRIN1-208ENST00000530008 GNGT2O14610 69 aa0.99□□□□□ -2.25
CAPRIN1-208ENST00000530008 Q9H521 79 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms