RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 GEMIN7Q9H840 131 aaKnown RBP10.98□□□□□ -0.65
USH1C-207ENST00000527720 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
USH1C-207ENST00000527720 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
USH1C-207ENST00000527720 CSNK1G2-AS1Q8NCQ2 148 aa10.98□□□□□ -0.65
USH1C-207ENST00000527720 PLAC8L1A1L4L8 177 aa10.97□□□□□ -0.65
USH1C-207ENST00000527720 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
USH1C-207ENST00000527720 OVOL2Q9BRP0 275 aa10.97□□□□□ -0.65
USH1C-207ENST00000527720 TRAV8-3A0A0A6YYJ7 113 aa10.97□□□□□ -0.65
USH1C-207ENST00000527720 A0A0B4J2C4 111 aa10.97□□□□□ -0.65
USH1C-207ENST00000527720 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
USH1C-207ENST00000527720 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
USH1C-207ENST00000527720 A4D1N5 150 aa10.96□□□□□ -0.65
USH1C-207ENST00000527720 WFDC10AQ9H1F0 79 aa10.96□□□□□ -0.65
USH1C-207ENST00000527720 NDUFA12Q9UI09 145 aa10.96□□□□□ -0.65
USH1C-207ENST00000527720 RPL35AP18077 110 aaKnown RBP10.96□□□□□ -0.66
USH1C-207ENST00000527720 WFDC2Q14508 124 aa10.96□□□□□ -0.66
USH1C-207ENST00000527720 MUSTN1Q8IVN3 82 aa10.96□□□□□ -0.66
USH1C-207ENST00000527720 GTSF1LQ9H1H1 148 aa10.96□□□□□ -0.66
USH1C-207ENST00000527720 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 LITAFQ99732 161 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 SPANXDQ9BXN6 97 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 SPANXCQ9NY87 97 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 TEX48A0A1B0GUV7 120 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 HERVK_113P63121 156 aa10.95□□□□□ -0.66
USH1C-207ENST00000527720 MTORP42345 2549 aa10.94□□□□□ -0.66
USH1C-207ENST00000527720 HELZ2Q9BYK8 2649 aaKnown RBP10.94□□□□□ -0.66
USH1C-207ENST00000527720 UNC79Q9P2D8 2635 aa10.94□□□□□ -0.66
USH1C-207ENST00000527720 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
USH1C-207ENST00000527720 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
USH1C-207ENST00000527720 SETXQ7Z333 2677 aaKnown RBP10.94□□□□□ -0.66
USH1C-207ENST00000527720 TRGV2A0A075B6R0 118 aa10.93□□□□□ -0.66
USH1C-207ENST00000527720 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
USH1C-207ENST00000527720 TIMM17BO60830 172 aa10.93□□□□□ -0.66
USH1C-207ENST00000527720 GAGE12JA6NER3 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 J3QR89 54 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 GAGE4Q13068 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 GAGE5Q13069 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 H7C423 109 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 GAGE7O76087 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 PF4P02776 101 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 LINC00694P0DN24 101 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 PSMB2P49721 201 aa10.92□□□□□ -0.66
USH1C-207ENST00000527720 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
USH1C-207ENST00000527720 LINC00242Q5T6M2 205 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 LINC00482Q8N8I6 264 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 RNF183Q96D59 192 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 SMR3AQ99954 134 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 NDUFA1O15239 70 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 KRTAP10-3P60369 221 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 MIAQ16674 131 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 TMEM101Q96IK0 257 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 HIVEP2P31629 2446 aa10.91□□□□□ -0.66
USH1C-207ENST00000527720 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
USH1C-207ENST00000527720 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
USH1C-207ENST00000527720 TMEM243Q9BU79 118 aa10.9□□□□□ -0.66
USH1C-207ENST00000527720 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
USH1C-207ENST00000527720 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
USH1C-207ENST00000527720 LY6G6DO95868 133 aa10.89□□□□□ -0.67
USH1C-207ENST00000527720 ATP6V0E2Q8NHE4 81 aa10.89□□□□□ -0.67
USH1C-207ENST00000527720 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
USH1C-207ENST00000527720 UBE2L6O14933 153 aa10.89□□□□□ -0.67
USH1C-207ENST00000527720 COX6A2Q02221 97 aa10.89□□□□□ -0.67
USH1C-207ENST00000527720 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.89□□□□□ -0.67
USH1C-207ENST00000527720 JMJD1CQ15652 2540 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 A8MZ25 164 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 TCL1BO95988 128 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 IFITM1P13164 125 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 SFTA2Q6UW10 78 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 SCGB1C2P0DMR2 95 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 INSL3P51460 131 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
USH1C-207ENST00000527720 PRSS2P07478 247 aa10.87□□□□□ -0.67
USH1C-207ENST00000527720 KIR2DL5BQ8NHK3 375 aa10.87□□□□□ -0.67
USH1C-207ENST00000527720 MTURNQ8N3F0 131 aa10.87□□□□□ -0.67
USH1C-207ENST00000527720 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
USH1C-207ENST00000527720 SMCPP49901 116 aaPredicted RBP10.86□□□□□ -0.67
USH1C-207ENST00000527720 CIRBPQ14011 172 aaKnown RBP10.86□□□□□ -0.67
USH1C-207ENST00000527720 FHL2Q14192 279 aa10.86□□□□□ -0.67
USH1C-207ENST00000527720 NIPBLQ6KC79 2804 aaeCLIP10.85□□□□□ -0.67
USH1C-207ENST00000527720 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
USH1C-207ENST00000527720 SMIM1B2RUZ4 78 aa10.85□□□□□ -0.67
USH1C-207ENST00000527720 TRBV30A0A0K0K1B3 111 aa10.84□□□□□ -0.67
USH1C-207ENST00000527720 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
USH1C-207ENST00000527720 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
USH1C-207ENST00000527720 LOC100131303A0A0U1RQF7 123 aa10.84□□□□□ -0.67
USH1C-207ENST00000527720 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
USH1C-207ENST00000527720 Q1RN00 199 aa10.83□□□□□ -0.68
USH1C-207ENST00000527720 F5H768 121 aa10.83□□□□□ -0.68
USH1C-207ENST00000527720 M0QXV9 152 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms