RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 GABARAPL2P60520 117 aa3.6□□□□□ -1.83
VPS26B-204ENST00000527586 SCGB2B2Q4G0G5 96 aa3.6□□□□□ -1.83
VPS26B-204ENST00000527586 MIC13Q5XKP0 118 aa3.6□□□□□ -1.83
VPS26B-204ENST00000527586 OR11H4Q8NGC9 324 aa3.6□□□□□ -1.83
VPS26B-204ENST00000527586 NMES1Q9C002 83 aa3.6□□□□□ -1.83
VPS26B-204ENST00000527586 H3BVH4 76 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 K7EN84 100 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 UBE2L6O14933 153 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 PDE6DO43924 150 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 IFNA1P01562 189 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 DDTP30046 118 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 TAS2R19P59542 299 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 NEDD8Q15843 81 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 ZNF56Q15929 161 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 CCDC32Q9BV29 185 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 FUNDC2Q9BWH2 189 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 SLC25A2Q9BXI2 301 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 NDUFB11Q9NX14 153 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 IL36BQ9NZH7 164 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 OR5AC2Q9NZP5 309 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
VPS26B-204ENST00000527586 K7ERU9 68 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 M0R381 172 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 CCL25O15444 150 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 BCL2L11O43521 198 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 GCGP01275 180 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 MBPP02686 304 aaPredicted RBP3.58□□□□□ -1.84
VPS26B-204ENST00000527586 CD3DP04234 171 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 ESDP10768 282 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 SNRPEP62304 92 aaKnown RBP3.58□□□□□ -1.84
VPS26B-204ENST00000527586 MXD1Q05195 221 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 FAM19A2Q8N3H0 131 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 SMIM20Q8N5G0 67 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 PGLYRP4Q96LB8 373 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 HYLS1Q96M11 299 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 ACTR3CQ9C0K3 210 aaPredicted RBP3.58□□□□□ -1.84
VPS26B-204ENST00000527586 PSENENQ9NZ42 101 aa3.58□□□□□ -1.84
VPS26B-204ENST00000527586 IGKV3D-20A0A0C4DH25 116 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 C9orf92A6NGG3 77 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 SPINK1P00995 79 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 GIPP09681 153 aaPredicted RBP3.57□□□□□ -1.84
VPS26B-204ENST00000527586 SDC2P34741 201 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 SULT1A1P50225 295 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 CKS1BP61024 79 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 MRPS10P82664 201 aaKnown RBP3.57□□□□□ -1.84
VPS26B-204ENST00000527586 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 TAL2Q16559 108 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 TMEM128Q5BJH2 165 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 GOLT1AQ6ZVE7 132 aa3.57□□□□□ -1.84
VPS26B-204ENST00000527586 RBM38Q9H0Z9 239 aaKnown RBP3.57□□□□□ -1.84
VPS26B-204ENST00000527586 TXNL4BQ9NX01 149 aaKnown RBP3.57□□□□□ -1.84
VPS26B-204ENST00000527586 RSL24D1Q9UHA3 163 aaKnown RBP3.57□□□□□ -1.84
VPS26B-204ENST00000527586 TINCRA0A1B0GVN0 87 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 VCYO14598 125 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 ARMS2P0C7Q2 107 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 PQLC2Q6ZP29 291 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 SNX29P2Q8IUI4 249 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 Q8N377 158 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 Q8NBF4 154 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 FXYD5Q96DB9 178 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 BTF3L4Q96K17 158 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 C2orf48Q96LS8 159 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 IMMP2LQ96T52 175 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 NDFIP1Q9BT67 221 aa3.56□□□□□ -1.84
VPS26B-204ENST00000527586 A0A087WXM4 84 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 TGIF2-C20orf24A0A0A6YYL0 155 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 ANKRD20A5PA0PJZ0 165 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 C20orf202A1L168 122 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 KRBOX1C9JBD0 128 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 M0R143 59 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 PVALBP20472 110 aaPredicted RBP3.55□□□□□ -1.84
VPS26B-204ENST00000527586 LSM3P62310 102 aaKnown RBP3.55□□□□□ -1.84
VPS26B-204ENST00000527586 UBE2NLQ5JXB2 153 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 COMMD7Q86VX2 200 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 C9orf62Q8N4C0 152 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 MRAP2Q96G30 205 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 SIGMAR1Q99720 223 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 MED28Q9H204 178 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 LYRM2Q9NU23 88 aaPredicted RBP3.55□□□□□ -1.84
VPS26B-204ENST00000527586 SCP2D1Q9UJQ7 156 aa3.55□□□□□ -1.84
VPS26B-204ENST00000527586 LINC00959A0A1B0GUT2 108 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 SCO1O75880 301 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 SLC25A6P12236 298 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 TGFBR1P36897 503 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 CTF1Q16619 201 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 TMEM14EPQ6UXP3 125 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 MIR17HGQ75NE6 70 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 TMEM252Q8N6L7 170 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 OR13C6PQ8NH95 151 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 CMTM2Q8TAZ6 248 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 MAP1LC3AQ9H492 121 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 UQCC1Q9NVA1 299 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 MCUBQ9NWR8 336 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 SS18L2Q9UHA2 77 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 ZFP30Q9Y2G7 519 aa3.54□□□□□ -1.84
VPS26B-204ENST00000527586 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
VPS26B-204ENST00000527586 SLC25A20O43772 301 aa3.53□□□□□ -1.84
VPS26B-204ENST00000527586 TLX1NBP0CAT3 122 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms