RNA–Protein interactions for RNA: ENST00000526504.5

ME3-205, Transcript of malic enzyme 3, humanhuman

TSL 2

Gene ME3, Length 1,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-205ENST00000526504 GAGE12FP0CL80 117 aa15.86■□□□□ 0.13
ME3-205ENST00000526504 GAGE12GP0CL81 117 aa15.86■□□□□ 0.13
ME3-205ENST00000526504 GAGE12IP0CL82 117 aa15.86■□□□□ 0.13
ME3-205ENST00000526504 UBE2D3P61077 147 aa15.86■□□□□ 0.13
ME3-205ENST00000526504 UBE2D2P62837 147 aa15.86■□□□□ 0.13
ME3-205ENST00000526504 MRPS36P82909 103 aaKnown RBP15.86■□□□□ 0.13
ME3-205ENST00000526504 TRBV6-4A0A1B0GX49 114 aa15.85■□□□□ 0.13
ME3-205ENST00000526504 ZNF815PA8K554 130 aa15.85■□□□□ 0.13
ME3-205ENST00000526504 B9D2Q9BPU9 175 aa15.85■□□□□ 0.13
ME3-205ENST00000526504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.85■□□□□ 0.13
ME3-205ENST00000526504 TMEM223A0PJW6 202 aa15.85■□□□□ 0.13
ME3-205ENST00000526504 IGKV2-29A2NJV5 120 aaPredicted RBP15.85■□□□□ 0.13
ME3-205ENST00000526504 SMIM9A6NGZ8 99 aa15.85■□□□□ 0.13
ME3-205ENST00000526504 ZNF22P17026 224 aaPredicted RBP15.85■□□□□ 0.13
ME3-205ENST00000526504 GCSHP23434 173 aa15.85■□□□□ 0.13
ME3-205ENST00000526504 A0A0J9YXV3 536 aa15.84■□□□□ 0.13
ME3-205ENST00000526504 FXYD2P54710 66 aa15.84■□□□□ 0.13
ME3-205ENST00000526504 CEMP1Q6PRD7 247 aaPredicted RBP15.83■□□□□ 0.12
ME3-205ENST00000526504 LINC00612Q8N6U2 182 aa15.83■□□□□ 0.12
ME3-205ENST00000526504 RNF183Q96D59 192 aa15.83■□□□□ 0.12
ME3-205ENST00000526504 UBE2V1Q13404 147 aa15.82■□□□□ 0.12
ME3-205ENST00000526504 LEPROTO15243 131 aa15.82■□□□□ 0.12
ME3-205ENST00000526504 C9orf118A6NHY6 69 aa15.81■□□□□ 0.12
ME3-205ENST00000526504 HIST1H4GQ99525 98 aa15.81■□□□□ 0.12
ME3-205ENST00000526504 TM2D3Q9BRN9 247 aa15.81■□□□□ 0.12
ME3-205ENST00000526504 GTSF1LQ9H1H1 148 aa15.81■□□□□ 0.12
ME3-205ENST00000526504 TINCRA0A1B0GVN0 87 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 SPATA25Q9BR10 227 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 RETNQ9HD89 108 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 CSDC2Q9Y534 153 aaKnown RBP15.8■□□□□ 0.12
ME3-205ENST00000526504 X6R8D5 127 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 PRKDCP78527 4128 aaKnown RBP15.8■□□□□ 0.12
ME3-205ENST00000526504 J3QQQ9 107 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 SMIM13P0DJ93 91 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 TSPEAR-AS2P59090 65 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 Q6ZUT4 128 aa15.8■□□□□ 0.12
ME3-205ENST00000526504 GAGE12JA6NER3 117 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 SMAGPQ0VAQ4 97 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 GAGE4Q13068 117 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 GAGE5Q13069 117 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 FHL2Q14192 279 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 VAMP3Q15836 100 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 GAGE13Q4V321 117 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 NTM-AS1Q6ZSK4 140 aa15.79■□□□□ 0.12
ME3-205ENST00000526504 TRGV4A0A0C4DH28 118 aa15.78■□□□□ 0.12
ME3-205ENST00000526504 PTTG1IPP53801 180 aa15.78■□□□□ 0.12
ME3-205ENST00000526504 PLEKHB2Q96CS7 222 aa15.78■□□□□ 0.12
ME3-205ENST00000526504 SCGB1D4Q6XE38 83 aa15.77■□□□□ 0.12
ME3-205ENST00000526504 K7EP13 123 aa15.77■□□□□ 0.11
ME3-205ENST00000526504 LGALS3P17931 250 aaKnown RBP15.77■□□□□ 0.11
ME3-205ENST00000526504 CCL25O15444 150 aa15.76■□□□□ 0.11
ME3-205ENST00000526504 DGAT2L7PQ6IED9 249 aa15.76■□□□□ 0.11
ME3-205ENST00000526504 A0A0J9YY99 117 aa15.75■□□□□ 0.11
ME3-205ENST00000526504 UBE2D1P51668 147 aa15.75■□□□□ 0.11
ME3-205ENST00000526504 OR5A1Q8NGJ0 315 aa15.75■□□□□ 0.11
ME3-205ENST00000526504 SPANXB1Q9NS25 103 aaPredicted RBP15.75■□□□□ 0.11
ME3-205ENST00000526504 TENM3Q9P273 2699 aa15.75■□□□□ 0.11
ME3-205ENST00000526504 LINC00694P0DN24 101 aa15.75■□□□□ 0.11
ME3-205ENST00000526504 RNASE13Q5GAN3 156 aaKnown RBP15.75■□□□□ 0.11
ME3-205ENST00000526504 H7C423 109 aa15.74■□□□□ 0.11
ME3-205ENST00000526504 NHLRC4P0CG21 123 aaPredicted RBP15.74■□□□□ 0.11
ME3-205ENST00000526504 TIRAPP58753 221 aa15.74■□□□□ 0.11
ME3-205ENST00000526504 AMMECR1LQ6DCA0 310 aa15.74■□□□□ 0.11
ME3-205ENST00000526504 A0A1B0GWB2 263 aa15.73■□□□□ 0.11
ME3-205ENST00000526504 FAM19A3Q7Z5A8 133 aa15.73■□□□□ 0.11
ME3-205ENST00000526504 IGLV5-45A0A087WSX0 123 aa15.72■□□□□ 0.11
ME3-205ENST00000526504 TMEM243Q9BU79 118 aa15.72■□□□□ 0.11
ME3-205ENST00000526504 NHP2Q9NX24 153 aaKnown RBP15.72■□□□□ 0.11
ME3-205ENST00000526504 DNAH9Q9NYC9 4486 aa15.72■□□□□ 0.11
ME3-205ENST00000526504 COL7A1Q02388 2944 aa15.72■□□□□ 0.11
ME3-205ENST00000526504 LOC100131303A0A0U1RQF7 123 aa15.72■□□□□ 0.11
ME3-205ENST00000526504 MIFP14174 115 aa15.72■□□□□ 0.11
ME3-205ENST00000526504 LYRM9A8MSI8 78 aa15.71■□□□□ 0.11
ME3-205ENST00000526504 RAB37Q96AX2 223 aa15.71■□□□□ 0.11
ME3-205ENST00000526504 IGHV1-58A0A0C4DH39 117 aa15.7■□□□□ 0.1
ME3-205ENST00000526504 H3BUT2 72 aa15.7■□□□□ 0.1
ME3-205ENST00000526504 IGHV3-30-3P0DP02 117 aa15.7■□□□□ 0.1
ME3-205ENST00000526504 DEFB130BP0DP73 79 aa15.7■□□□□ 0.1
ME3-205ENST00000526504 DEFB130AP0DP74 79 aa15.7■□□□□ 0.1
ME3-205ENST00000526504 SRSF9Q13242 221 aaKnown RBP eCLIP15.7■□□□□ 0.1
ME3-205ENST00000526504 C12orf74Q32Q52 190 aa15.7■□□□□ 0.1
ME3-205ENST00000526504 GEMIN7Q9H840 131 aaKnown RBP15.7■□□□□ 0.1
ME3-205ENST00000526504 IGHV4-28A0A0C4DH34 117 aa15.69■□□□□ 0.1
ME3-205ENST00000526504 Q8NAQ8 132 aa15.69■□□□□ 0.1
ME3-205ENST00000526504 TMEM238LA0A1B0GVL6 79 aa15.68■□□□□ 0.1
ME3-205ENST00000526504 A6NJY4 79 aa15.68■□□□□ 0.1
ME3-205ENST00000526504 VSIG2Q96IQ7 327 aa15.68■□□□□ 0.1
ME3-205ENST00000526504 CDC42SE2Q9NRR3 84 aa15.68■□□□□ 0.1
ME3-205ENST00000526504 A0A1W2PPM0 123 aa15.67■□□□□ 0.1
ME3-205ENST00000526504 HUWE1Q7Z6Z7 4374 aaKnown RBP15.67■□□□□ 0.1
ME3-205ENST00000526504 K7ERJ3 54 aa15.67■□□□□ 0.1
ME3-205ENST00000526504 IGHV3-64A0A075B6Q5 118 aa15.66■□□□□ 0.1
ME3-205ENST00000526504 UBE2L6O14933 153 aa15.66■□□□□ 0.1
ME3-205ENST00000526504 DEFB4AO15263 64 aa15.66■□□□□ 0.1
ME3-205ENST00000526504 HERVK_113P63121 156 aa15.66■□□□□ 0.1
ME3-205ENST00000526504 GTF2H5Q6ZYL4 71 aa15.65■□□□□ 0.1
ME3-205ENST00000526504 TMEM101Q96IK0 257 aa15.65■□□□□ 0.1
ME3-205ENST00000526504 STAB2Q8WWQ8 2551 aa15.65■□□□□ 0.1
ME3-205ENST00000526504 TRBV6-8A0A0A6YYG3 113 aa15.64■□□□□ 0.1
ME3-205ENST00000526504 IGHV3-30P01768 117 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms