RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 ETDBQ3ZM63 59 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 SFTA2Q6UW10 78 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 SPANXDQ9BXN6 97 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 SPANXCQ9NY87 97 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 PDZD2O15018 2839 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 ADARB2-AS1A8MUL3 147 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 CIDEAO60543 219 aa11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-203ENST00000525503 KMT2BQ9UMN6 2715 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 RPL35AP18077 110 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 LITAFQ99732 161 aa11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 C19orf73Q9NVV2 129 aa11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 ERG28Q9UKR5 140 aa11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 SONP18583 2426 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-203ENST00000525503 IGHV3-33P01772 117 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 SCGB1C2P0DMR2 95 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 MTURNQ8N3F0 131 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 NBPF19A0A087WUL8 3843 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 HERVK_113P63121 156 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
CCDC90B-203ENST00000525503 TIMM17BO60830 172 aa11.79□□□□□ -0.52
CCDC90B-203ENST00000525503 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
CCDC90B-203ENST00000525503 ATP6V0E2Q8NHE4 81 aa11.79□□□□□ -0.52
CCDC90B-203ENST00000525503 WFDC10AQ9H1F0 79 aa11.79□□□□□ -0.52
CCDC90B-203ENST00000525503 NF1P21359 2839 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 TRGV2A0A075B6R0 118 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 TCL1BO95988 128 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 GAGE4Q13068 117 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 GAGE5Q13069 117 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 MIAQ16674 131 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 PLAC8L1A1L4L8 177 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 PRSS2P07478 247 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 SBSPONQ8IVN8 264 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
CCDC90B-203ENST00000525503 CCDC168Q8NDH2 2452 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 GAGE7O76087 117 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 GAGE12FP0CL80 117 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 GAGE12GP0CL81 117 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 GAGE12IP0CL82 117 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 NTM-AS1Q6ZSK4 140 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
CCDC90B-203ENST00000525503 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 NDUFA1O15239 70 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 SMCPP49901 116 aaPredicted RBP11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 TRBV6-4A0A1B0GX49 114 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 A8MZ25 164 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 LINC00242Q5T6M2 205 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 RNF183Q96D59 192 aa11.76□□□□□ -0.53
CCDC90B-203ENST00000525503 IGLV5-39A0A0G2JS06 123 aa11.75□□□□□ -0.53
CCDC90B-203ENST00000525503 UBE2L6O14933 153 aa11.75□□□□□ -0.53
CCDC90B-203ENST00000525503 IFITM1P13164 125 aa11.75□□□□□ -0.53
CCDC90B-203ENST00000525503 COX6A2Q02221 97 aa11.75□□□□□ -0.53
CCDC90B-203ENST00000525503 Q1RN00 199 aa11.75□□□□□ -0.53
CCDC90B-203ENST00000525503 TMEM243Q9BU79 118 aa11.75□□□□□ -0.53
CCDC90B-203ENST00000525503 CDC42SE2Q9NRR3 84 aa11.74□□□□□ -0.53
CCDC90B-203ENST00000525503 H7C2G1 150 aa11.74□□□□□ -0.53
CCDC90B-203ENST00000525503 H7C423 109 aa11.74□□□□□ -0.53
CCDC90B-203ENST00000525503 CIRBPQ14011 172 aaKnown RBP11.74□□□□□ -0.53
CCDC90B-203ENST00000525503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.74□□□□□ -0.53
CCDC90B-203ENST00000525503 TRGV4A0A0C4DH28 118 aa11.73□□□□□ -0.53
CCDC90B-203ENST00000525503 FOXI1Q12951 378 aa11.72□□□□□ -0.53
CCDC90B-203ENST00000525503 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
CCDC90B-203ENST00000525503 PF4P02776 101 aa11.72□□□□□ -0.53
CCDC90B-203ENST00000525503 TRBV30A0A0K0K1B3 111 aa11.71□□□□□ -0.53
CCDC90B-203ENST00000525503 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
CCDC90B-203ENST00000525503 ATXN8Q156A1 80 aa11.7□□□□□ -0.54
CCDC90B-203ENST00000525503 TEN1Q86WV5 123 aa11.7□□□□□ -0.54
CCDC90B-203ENST00000525503 WNK1Q9H4A3 2382 aa11.7□□□□□ -0.54
CCDC90B-203ENST00000525503 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
CCDC90B-203ENST00000525503 M0QXV9 152 aa11.7□□□□□ -0.54
CCDC90B-203ENST00000525503 SPATA25Q9BR10 227 aa11.7□□□□□ -0.54
CCDC90B-203ENST00000525503 INSL3P51460 131 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 LINC00482Q8N8I6 264 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 PPDPFLQ8WWR9 84 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 Q9H8V8 135 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 CUBNO60494 3623 aa11.69□□□□□ -0.54
CCDC90B-203ENST00000525503 SETXQ7Z333 2677 aaKnown RBP11.68□□□□□ -0.54
CCDC90B-203ENST00000525503 LOC100131303A0A0U1RQF7 123 aa11.68□□□□□ -0.54
CCDC90B-203ENST00000525503 FHL2Q14192 279 aa11.68□□□□□ -0.54
CCDC90B-203ENST00000525503 SMR3AQ99954 134 aa11.68□□□□□ -0.54
CCDC90B-203ENST00000525503 KRTAP10-3P60369 221 aa11.68□□□□□ -0.54
CCDC90B-203ENST00000525503 NIPBLQ6KC79 2804 aaeCLIP11.67□□□□□ -0.54
CCDC90B-203ENST00000525503 HELZ2Q9BYK8 2649 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-203ENST00000525503 TRIAP1O43715 76 aa11.67□□□□□ -0.54
CCDC90B-203ENST00000525503 SLC25A20O43772 301 aa11.67□□□□□ -0.54
CCDC90B-203ENST00000525503 NPC2P61916 151 aa11.67□□□□□ -0.54
CCDC90B-203ENST00000525503 ICOSQ9Y6W8 199 aa11.67□□□□□ -0.54
CCDC90B-203ENST00000525503 C9JAW5 83 aa11.66□□□□□ -0.54
CCDC90B-203ENST00000525503 F5H768 121 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms