RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HIGD1BQ9P298 99 aa9.64□□□□□ -0.87
PCDHGB1-201ENST00000523390 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
PCDHGB1-201ENST00000523390 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
PCDHGB1-201ENST00000523390 IGHV1-58A0A0C4DH39 117 aa9.63□□□□□ -0.87
PCDHGB1-201ENST00000523390 IFITM1P13164 125 aa9.63□□□□□ -0.87
PCDHGB1-201ENST00000523390 WFDC2Q14508 124 aa9.63□□□□□ -0.87
PCDHGB1-201ENST00000523390 CARD19Q96LW7 228 aa9.63□□□□□ -0.87
PCDHGB1-201ENST00000523390 FRYQ5TBA9 3013 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 F8W1H4 67 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 CRYGDP07320 174 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 C2orf91Q6ZV80 131 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
PCDHGB1-201ENST00000523390 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 GAGE12HA6NDE8 117 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 SHISA2Q6UWI4 295 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 USP24Q9UPU5 2620 aa9.61□□□□□ -0.87
PCDHGB1-201ENST00000523390 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 LYRM9A8MSI8 78 aa9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 RS1O15537 224 aa9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 SPAG11BQ08648 103 aa9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 C11orf45Q8TAV5 145 aa9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 CFAP46Q8IYW2 2715 aa9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
PCDHGB1-201ENST00000523390 IGHV4-4A0A075B6R2 117 aa9.59□□□□□ -0.87
PCDHGB1-201ENST00000523390 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
PCDHGB1-201ENST00000523390 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
PCDHGB1-201ENST00000523390 G3V4G9 280 aa9.59□□□□□ -0.87
PCDHGB1-201ENST00000523390 LINC00269Q8N2A0 174 aa9.59□□□□□ -0.87
PCDHGB1-201ENST00000523390 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
PCDHGB1-201ENST00000523390 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 F8WEM9 126 aa9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 BRI3O95415 125 aa9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 POLR2KP53803 58 aaKnown RBP9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 DSPP15924 2871 aaKnown RBP9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 LOC100131303A0A0U1RQF7 123 aa9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 NDUFA7O95182 113 aa9.58□□□□□ -0.88
PCDHGB1-201ENST00000523390 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 HELZ2Q9BYK8 2649 aaKnown RBP9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 SOCS3O14543 225 aa9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 TSHBP01222 138 aa9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 ZNF580Q9UK33 172 aa9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 FLNAP21333 2647 aaKnown RBP9.57□□□□□ -0.88
PCDHGB1-201ENST00000523390 IGHV4-28A0A0C4DH34 117 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 MIFP14174 115 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 ZFAND6Q6FIF0 208 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
PCDHGB1-201ENST00000523390 PRB2P02812 416 aaPredicted RBP9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 TRBV6-8A0A0A6YYG3 113 aa9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 NDUFA1O15239 70 aa9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 IGLV1-51P01701 117 aa9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 REG3AQ06141 175 aa9.55□□□□□ -0.88
PCDHGB1-201ENST00000523390 COL27A1Q8IZC6 1860 aaPredicted RBP9.54□□□□□ -0.88
PCDHGB1-201ENST00000523390 BAALC-AS2P0C853 105 aa9.53□□□□□ -0.88
PCDHGB1-201ENST00000523390 A8MZ25 164 aa9.53□□□□□ -0.88
PCDHGB1-201ENST00000523390 UBE2BP63146 152 aa9.53□□□□□ -0.88
PCDHGB1-201ENST00000523390 HIGD2BQ4VC39 106 aa9.53□□□□□ -0.88
PCDHGB1-201ENST00000523390 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
PCDHGB1-201ENST00000523390 ITPR3Q14573 2671 aa9.52□□□□□ -0.88
PCDHGB1-201ENST00000523390 MAP1AP78559 2803 aaPredicted RBP9.52□□□□□ -0.88
PCDHGB1-201ENST00000523390 MGAM2Q2M2H8 2515 aa9.52□□□□□ -0.88
PCDHGB1-201ENST00000523390 COX8CQ7Z4L0 72 aa9.52□□□□□ -0.88
PCDHGB1-201ENST00000523390 RPL32P62910 135 aaKnown RBP9.52□□□□□ -0.89
PCDHGB1-201ENST00000523390 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
PCDHGB1-201ENST00000523390 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
PCDHGB1-201ENST00000523390 NCR3O14931 201 aa9.51□□□□□ -0.89
PCDHGB1-201ENST00000523390 C1orf158Q8N1D5 194 aa9.51□□□□□ -0.89
PCDHGB1-201ENST00000523390 LINC01620Q4KN68 170 aa9.51□□□□□ -0.89
PCDHGB1-201ENST00000523390 IGHV4-30-4P0DP06 118 aa9.51□□□□□ -0.89
PCDHGB1-201ENST00000523390 ATRQ13535 2644 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 CXCL5P42830 114 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 MIAQ16674 131 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 AKAP13Q12802 2813 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 CLEC2BQ92478 149 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 CRYBA4P53673 196 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 ANKRD29Q8N6D5 301 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 PTH2Q96A98 100 aa9.5□□□□□ -0.89
PCDHGB1-201ENST00000523390 DEFB105AQ8NG35 78 aa9.49□□□□□ -0.89
PCDHGB1-201ENST00000523390 KIR2DL5BQ8NHK3 375 aa9.49□□□□□ -0.89
PCDHGB1-201ENST00000523390 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
PCDHGB1-201ENST00000523390 A0A096LNJ9 63 aa9.49□□□□□ -0.89
PCDHGB1-201ENST00000523390 C16orf95Q9H693 158 aa9.49□□□□□ -0.89
PCDHGB1-201ENST00000523390 HAMPP81172 84 aa9.48□□□□□ -0.89
PCDHGB1-201ENST00000523390 ORMDL1Q9P0S3 153 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms