RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRAV8-6A0A0B4J262 113 aa8.97□□□□□ -0.97
CPNE3-205ENST00000522240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
CPNE3-205ENST00000522240 FGF6P10767 208 aa8.97□□□□□ -0.97
CPNE3-205ENST00000522240 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
CPNE3-205ENST00000522240 ESRGQ1W209 222 aa8.97□□□□□ -0.97
CPNE3-205ENST00000522240 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
CPNE3-205ENST00000522240 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.98
CPNE3-205ENST00000522240 GAGE6Q13070 117 aa8.96□□□□□ -0.98
CPNE3-205ENST00000522240 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
CPNE3-205ENST00000522240 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
CPNE3-205ENST00000522240 MAP1LC3CQ9BXW4 147 aa8.96□□□□□ -0.98
CPNE3-205ENST00000522240 MRPS16Q9Y3D3 137 aaKnown RBP8.96□□□□□ -0.98
CPNE3-205ENST00000522240 TENM2Q9NT68 2774 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 A0A1B0GUV1 79 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 CCL18P55774 89 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 Q6ZN92 141 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 OR5A1Q8NGJ0 315 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 OR10D4PQ8NGN7 298 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 TMEM101Q96IK0 257 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 UPK3BQ9BT76 320 aa8.95□□□□□ -0.98
CPNE3-205ENST00000522240 LOC105371267A0A1B0GV96 52 aa8.94□□□□□ -0.98
CPNE3-205ENST00000522240 C3orf79P0CE67 100 aa8.94□□□□□ -0.98
CPNE3-205ENST00000522240 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
CPNE3-205ENST00000522240 Q6ZUT4 128 aa8.94□□□□□ -0.98
CPNE3-205ENST00000522240 BAALCQ8WXS3 180 aa8.94□□□□□ -0.98
CPNE3-205ENST00000522240 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 KRTDAPP60985 99 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 LINC00588Q9Y4M8 146 aa8.93□□□□□ -0.98
CPNE3-205ENST00000522240 A0A087WX48 190 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 RBX1P62877 108 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 WFDC10BQ8IUB3 73 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 FAM104AQ969W3 186 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 AMELXQ99217 191 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
CPNE3-205ENST00000522240 C20orf202A1L168 122 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 TMEM262E9PQX1 116 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 PRSS1P07477 247 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 PMVKQ15126 192 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 LINC01556Q5JQF7 62 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 LGALS9CQ6DKI2 356 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 TEX43Q6ZNM6 134 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 ZNF664Q8N3J9 261 aa8.91□□□□□ -0.98
CPNE3-205ENST00000522240 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 DNAH10OSP0CZ25 163 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 AKR1D1P51857 326 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 ODF1Q14990 250 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 Q8N976 141 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 OPRPNQ99935 248 aaPredicted RBP8.9□□□□□ -0.98
CPNE3-205ENST00000522240 C2orf88Q9BSF0 95 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 VCX2Q9H322 139 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.98
CPNE3-205ENST00000522240 CASC10Q5T4H9 136 aa8.89□□□□□ -0.99
CPNE3-205ENST00000522240 CST9LQ9H4G1 147 aa8.89□□□□□ -0.99
CPNE3-205ENST00000522240 RYR2Q92736 4967 aa8.88□□□□□ -0.99
CPNE3-205ENST00000522240 PRSS29PA6NIE9 313 aa8.88□□□□□ -0.99
CPNE3-205ENST00000522240 F8VRH5 84 aa8.88□□□□□ -0.99
CPNE3-205ENST00000522240 H0Y8G0 127 aa8.88□□□□□ -0.99
CPNE3-205ENST00000522240 SIVA1O15304 175 aa8.88□□□□□ -0.99
CPNE3-205ENST00000522240 JOSD1Q15040 202 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-205ENST00000522240 UBE2DNLQ8IWF7 75 aa8.88□□□□□ -0.99
CPNE3-205ENST00000522240 ANGP03950 147 aaKnown RBP8.87□□□□□ -0.99
CPNE3-205ENST00000522240 RNASE13Q5GAN3 156 aaKnown RBP8.87□□□□□ -0.99
CPNE3-205ENST00000522240 FAM19A3Q7Z5A8 133 aa8.87□□□□□ -0.99
CPNE3-205ENST00000522240 Q8N3U1 123 aa8.87□□□□□ -0.99
CPNE3-205ENST00000522240 CHTOPQ9Y3Y2 248 aaKnown RBP8.87□□□□□ -0.99
CPNE3-205ENST00000522240 K7EP13 123 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 UBE2D1P51668 147 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 ZC2HC1BQ5TFG8 222 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 LYSTQ99698 3801 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
CPNE3-205ENST00000522240 SACSQ9NZJ4 4579 aa8.86□□□□□ -0.99
CPNE3-205ENST00000522240 IGLV4-69A0A075B6H9 119 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 CCL25O15444 150 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 DPM2O94777 84 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 PLNP26678 52 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 SEC11AP67812 179 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
CPNE3-205ENST00000522240 DNAH1Q9P2D7 4330 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 SCGB1D1O95968 90 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 CRPP02741 224 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 SMIM6P0DI80 62 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 REG3AQ06141 175 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 LINC00269Q8N2A0 174 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
CPNE3-205ENST00000522240 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms