RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 IGLV5-52A0A0A0MRZ9 124 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 HLA-DQA1P01909 254 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 MT-ND6P03923 174 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 FCER1GP30273 86 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
CLK4-209ENST00000521621 AMMECR1LQ6DCA0 310 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 ZNF664Q8N3J9 261 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 SMKR1H3BMG3 65 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 NPYP01303 97 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 Q8N8P6 123 aa6.2□□□□□ -1.42
CLK4-209ENST00000521621 G0S2P27469 103 aa6.19□□□□□ -1.42
CLK4-209ENST00000521621 WFDC2Q14508 124 aa6.19□□□□□ -1.42
CLK4-209ENST00000521621 CFAP161Q6P656 301 aa6.19□□□□□ -1.42
CLK4-209ENST00000521621 BAALCQ8WXS3 180 aa6.19□□□□□ -1.42
CLK4-209ENST00000521621 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.18□□□□□ -1.42
CLK4-209ENST00000521621 IGKV2-29A2NJV5 120 aaPredicted RBP6.18□□□□□ -1.42
CLK4-209ENST00000521621 SNAPINO95295 136 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 SVBPQ8N300 66 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 MAP1LC3AQ9H492 121 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 NDUFA5Q16718 116 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
CLK4-209ENST00000521621 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 F8WDY8 70 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 FAM19A3Q7Z5A8 133 aa6.18□□□□□ -1.42
CLK4-209ENST00000521621 GVQW2A0A096LPI5 108 aaPredicted RBP6.17□□□□□ -1.42
CLK4-209ENST00000521621 LINC00959A0A1B0GUT2 108 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 FOXI1Q12951 378 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 ORMDL2Q53FV1 153 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 PKIGQ9Y2B9 76 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 SS18Q15532 418 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 LINC01561Q8N1V8 128 aa6.17□□□□□ -1.42
CLK4-209ENST00000521621 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
CLK4-209ENST00000521621 PRSS1P07477 247 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
CLK4-209ENST00000521621 Q8N1X5 172 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 CHCHD10Q8WYQ3 142 aaPredicted RBP6.16□□□□□ -1.42
CLK4-209ENST00000521621 FAM104AQ969W3 186 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 RYR1P21817 5038 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 XGP55808 180 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 C9orf163Q8N9P6 203 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 YPEL4Q96NS1 127 aa6.16□□□□□ -1.42
CLK4-209ENST00000521621 C1orf196B1AJZ1 125 aa6.15□□□□□ -1.42
CLK4-209ENST00000521621 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.43
CLK4-209ENST00000521621 CIRBPQ14011 172 aaKnown RBP6.15□□□□□ -1.43
CLK4-209ENST00000521621 C15orf56Q8N910 161 aa6.15□□□□□ -1.43
CLK4-209ENST00000521621 IGHV1-58A0A0C4DH39 117 aa6.14□□□□□ -1.43
CLK4-209ENST00000521621 RAB5AP20339 215 aa6.14□□□□□ -1.43
CLK4-209ENST00000521621 ALKBH7Q9BT30 221 aaPredicted RBP6.14□□□□□ -1.43
CLK4-209ENST00000521621 RPS10P5Q9NQ39 176 aa6.14□□□□□ -1.43
CLK4-209ENST00000521621 HSPG2P98160 4391 aa6.14□□□□□ -1.43
CLK4-209ENST00000521621 CLPSL2Q6UWE3 100 aa6.13□□□□□ -1.43
CLK4-209ENST00000521621 AMELXQ99217 191 aa6.13□□□□□ -1.43
CLK4-209ENST00000521621 TIMM17AQ99595 171 aa6.13□□□□□ -1.43
CLK4-209ENST00000521621 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
CLK4-209ENST00000521621 IGLV10-54A0A075B6I4 117 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 IFI27P40305 119 aaPredicted RBP6.12□□□□□ -1.43
CLK4-209ENST00000521621 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 RNF151Q2KHN1 245 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 PAPPA-AS1Q5QFB9 102 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 TOMM6Q96B49 74 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 AP5S1Q9NUS5 200 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.12□□□□□ -1.43
CLK4-209ENST00000521621 Q6ZUT4 128 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 OR10D4PQ8NGN7 298 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 TMEM141Q96I45 108 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
CLK4-209ENST00000521621 IGLV4-3A0A075B6K6 122 aa6.11□□□□□ -1.43
CLK4-209ENST00000521621 APOC3P02656 99 aa6.11□□□□□ -1.43
CLK4-209ENST00000521621 ODF1Q14990 250 aa6.11□□□□□ -1.43
CLK4-209ENST00000521621 SDIM1Q6ZPB5 146 aa6.11□□□□□ -1.43
CLK4-209ENST00000521621 MRPL18Q9H0U6 180 aaKnown RBP6.11□□□□□ -1.43
CLK4-209ENST00000521621 KIAA1109Q2LD37 5005 aa6.11□□□□□ -1.43
CLK4-209ENST00000521621 LECT2O14960 151 aa6.11□□□□□ -1.43
CLK4-209ENST00000521621 IGHV3-64A0A075B6Q5 118 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 EPM2AB3EWF7 344 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
CLK4-209ENST00000521621 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 IGHV3OR16-9A0A0B4J2B5 98 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 COX7A2LO14548 114 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 APOMO95445 188 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 DEFB104AQ8WTQ1 72 aa6.1□□□□□ -1.43
CLK4-209ENST00000521621 hDV102S1A0JD36 115 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 CHAC1Q9BUX1 264 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
CLK4-209ENST00000521621 SLPIP03973 132 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 UBE2D1P51668 147 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 SEC11AP67812 179 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 ERASQ7Z444 233 aa6.09□□□□□ -1.43
CLK4-209ENST00000521621 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 C2orf88Q9BSF0 95 aa6.08□□□□□ -1.44
CLK4-209ENST00000521621 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms