RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 RPL39P62891 51 aaKnown RBP2.5□□□□□ -2.01
CSMD3-209ENST00000519485 Q8N9W7 124 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 LINC00308Q8TCZ7 52 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 C2orf48Q96LS8 159 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 FAM215AQ9Y5M1 114 aa2.5□□□□□ -2.01
CSMD3-209ENST00000519485 INTS1Q8N201 2190 aaKnown RBP2.5□□□□□ -2.01
CSMD3-209ENST00000519485 A0A0C4DFX4 3053 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV1OR15-1A0A075B7D0 117 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV3-16A0A0C4DH30 117 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 FAM236DA0A1B0GTK5 79 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 TMEM89A2RUT3 159 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 CLPSL1A2RUU4 121 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 GNRH2O43555 120 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV3-23P01764 117 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 CCKP06307 115 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 FAM236CP0DP71 79 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 ECSCRQ19T08 205 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 FAM74A4Q5TZK3 123 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 FAM19A3Q7Z5A8 133 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 KIR2DL5BQ8NHK3 375 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 CLEC2BQ92478 149 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 TMEM243Q9BU79 118 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 JPT2Q9H910 190 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 ORMDL1Q9P0S3 153 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 KLK5Q9Y337 293 aaPredicted RBP2.49□□□□□ -2.01
CSMD3-209ENST00000519485 S4R3C0 116 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 CNTRLQ7Z7A1 2325 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 DNAJC13O75165 2243 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 CACNA1GO43497 2377 aa2.49□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV3-64A0A075B6Q5 118 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 E7EQL1 145 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 K7ENP7 123 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 DEFB109BQ30KR1 87 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 TMEM86BQ8N661 226 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 DYNLRB2Q8TF09 96 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 OBSCN-AS1Q96MR7 158 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 RHPN1-AS1Q9BWJ2 59 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 KNTC1P50748 2209 aa2.48□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV3OR16-10A0A075B7F0 116 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 TRAV12-3A0A0B4J271 114 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV3-35A0A0C4DH35 117 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 IGHV3-66A0A0C4DH42 116 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 TRBV10-1A0A0K0K1A3 114 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 IBA57-AS1B1ANH7 110 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 ERC2-IT1O76042 136 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 IGF1P05019 195 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 FBXL19-AS1Q494R0 122 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 PRR9Q5T870 116 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 CEMP1Q6PRD7 247 aaPredicted RBP2.47□□□□□ -2.01
CSMD3-209ENST00000519485 Q8N377 158 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 TMEM105Q8N8V8 129 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 LINC00467Q9BRT7 94 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 Q9H8V8 135 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 UBE2D4Q9Y2X8 147 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 V9GYY9 64 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 NAV3Q8IVL0 2385 aa2.47□□□□□ -2.01
CSMD3-209ENST00000519485 BRWD1Q9NSI6 2320 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 F6UB75 175 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 UBE2L6O14933 153 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 PFN2P35080 140 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 CMC4P56277 68 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-209ENST00000519485 CXCL6P80162 114 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 NDPQ00604 133 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 KLKP1Q107X0 134 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 LYPD5Q6UWN5 251 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 C5orf56Q8N8D9 126 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 C10orf105Q8TEF2 133 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 SMCR5Q8TEV8 140 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 UPK3BQ9BT76 320 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 SND1-IT1Q9HBX3 110 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 CENPFP49454 3210 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 MALRD1Q5VYJ5 2156 aa2.46□□□□□ -2.02
CSMD3-209ENST00000519485 COL27A1Q8IZC6 1860 aaPredicted RBP2.45□□□□□ -2.02
CSMD3-209ENST00000519485 KIAA0100Q14667 2235 aaKnown RBP2.45□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV3OR16-13A0A075B7E8 117 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV3OR16-8A0A075B7F1 116 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV3-49A0A0A0MS15 119 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV3-74A0A0B4J1X5 117 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 EPM2AB3EWF7 344 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 IGHV3-53P01767 116 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 XCL1P47992 114 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 BLCAPP62952 87 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 ATP1A1-AS1Q5TC04 95 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 HRCT1Q6UXD1 115 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 LINC01561Q8N1V8 128 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 C3orf56Q8N813 242 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 C11orf45Q8TAV5 145 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 ZNF625Q96I27 306 aaPredicted RBP2.45□□□□□ -2.02
CSMD3-209ENST00000519485 SIRPDQ9H106 197 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 C11orf68Q9H3H3 251 aaKnown RBP2.45□□□□□ -2.02
CSMD3-209ENST00000519485 XCL2Q9UBD3 114 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 CDKN2A-AS1Q9UH64 79 aa2.45□□□□□ -2.02
CSMD3-209ENST00000519485 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 TRANK1O15050 2925 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 IGKV3D-7A0A0C4DH55 119 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 LYRM9A8MSI8 78 aa2.44□□□□□ -2.02
CSMD3-209ENST00000519485 G3V318 75 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms