RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
CLN8-204ENST00000519254 VCX2Q9H322 139 aa10.16□□□□□ -0.78
CLN8-204ENST00000519254 TENM3Q9P273 2699 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 CRYBA4P53673 196 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 BATFQ16520 125 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 C12orf74Q32Q52 190 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 PAPPA-AS1Q5QFB9 102 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 PRADC1Q9BSG0 188 aa10.15□□□□□ -0.78
CLN8-204ENST00000519254 ATP5G1P05496 136 aa10.14□□□□□ -0.79
CLN8-204ENST00000519254 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
CLN8-204ENST00000519254 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
CLN8-204ENST00000519254 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
CLN8-204ENST00000519254 NANOS2P60321 138 aaKnown RBP10.14□□□□□ -0.79
CLN8-204ENST00000519254 TIMM21Q9BVV7 248 aa10.14□□□□□ -0.79
CLN8-204ENST00000519254 GTSF1LQ9H1H1 148 aa10.14□□□□□ -0.79
CLN8-204ENST00000519254 F5H768 121 aa10.13□□□□□ -0.79
CLN8-204ENST00000519254 SIVA1O15304 175 aa10.13□□□□□ -0.79
CLN8-204ENST00000519254 MPV17L2Q567V2 206 aa10.13□□□□□ -0.79
CLN8-204ENST00000519254 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
CLN8-204ENST00000519254 Q6ZTC4 211 aa10.13□□□□□ -0.79
CLN8-204ENST00000519254 MAPKAPK5-AS1Q8N8E1 139 aa10.13□□□□□ -0.79
CLN8-204ENST00000519254 MEGF8Q7Z7M0 2845 aa10.12□□□□□ -0.79
CLN8-204ENST00000519254 E9PLD3 99 aa10.12□□□□□ -0.79
CLN8-204ENST00000519254 Q6ZUT4 128 aa10.12□□□□□ -0.79
CLN8-204ENST00000519254 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
CLN8-204ENST00000519254 A0A0J9YXV3 536 aa10.11□□□□□ -0.79
CLN8-204ENST00000519254 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
CLN8-204ENST00000519254 CHAC1Q9BUX1 264 aa10.11□□□□□ -0.79
CLN8-204ENST00000519254 A0A0J9YY99 117 aa10.11□□□□□ -0.79
CLN8-204ENST00000519254 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
CLN8-204ENST00000519254 A0A1B0GV90 55 aa10.1□□□□□ -0.79
CLN8-204ENST00000519254 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
CLN8-204ENST00000519254 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
CLN8-204ENST00000519254 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 GYPEP15421 78 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
CLN8-204ENST00000519254 TMEM97Q5BJF2 176 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 BVES-AS1Q5T3Y7 98 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
CLN8-204ENST00000519254 TRAV26-1A0A087WT03 109 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 PAX4O43316 350 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 DGAT2L7PQ6IED9 249 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
CLN8-204ENST00000519254 HUWE1Q7Z6Z7 4374 aaKnown RBP10.08□□□□□ -0.8
CLN8-204ENST00000519254 HERVK_113P61574 105 aa10.08□□□□□ -0.8
CLN8-204ENST00000519254 COL5A1-AS1Q5SY13 56 aa10.08□□□□□ -0.8
CLN8-204ENST00000519254 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
CLN8-204ENST00000519254 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
CLN8-204ENST00000519254 VSIG2Q96IQ7 327 aa10.07□□□□□ -0.8
CLN8-204ENST00000519254 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 TINCRA0A1B0GVN0 87 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 H7C423 109 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 UBE2D1P51668 147 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 DEFB131BA0A096LNP1 70 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 CDC42SE2Q9NRR3 84 aa10.06□□□□□ -0.8
CLN8-204ENST00000519254 UBE2L6O14933 153 aa10.05□□□□□ -0.8
CLN8-204ENST00000519254 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
CLN8-204ENST00000519254 HSD52Q0P140 79 aa10.05□□□□□ -0.8
CLN8-204ENST00000519254 SMAGPQ0VAQ4 97 aa10.05□□□□□ -0.8
CLN8-204ENST00000519254 DNAH9Q9NYC9 4486 aa10.04□□□□□ -0.8
CLN8-204ENST00000519254 A0A096LPF7 62 aa10.04□□□□□ -0.8
CLN8-204ENST00000519254 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
CLN8-204ENST00000519254 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
CLN8-204ENST00000519254 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
CLN8-204ENST00000519254 GAGE6Q13070 117 aa10.03□□□□□ -0.8
CLN8-204ENST00000519254 PRKDCP78527 4128 aaKnown RBP10.03□□□□□ -0.8
CLN8-204ENST00000519254 TRAV10A0A0B4J240 114 aa10.03□□□□□ -0.8
CLN8-204ENST00000519254 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
CLN8-204ENST00000519254 LEPROTO15243 131 aa10.03□□□□□ -0.8
CLN8-204ENST00000519254 TIRAPP58753 221 aa10.03□□□□□ -0.8
CLN8-204ENST00000519254 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
CLN8-204ENST00000519254 J3QQQ9 107 aa10.02□□□□□ -0.81
CLN8-204ENST00000519254 FAM19A3Q7Z5A8 133 aa10.02□□□□□ -0.81
CLN8-204ENST00000519254 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
CLN8-204ENST00000519254 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
CLN8-204ENST00000519254 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
CLN8-204ENST00000519254 COX6A2Q02221 97 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 PLEKHB2Q96CS7 222 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 IGLV4-60A0A075B6I1 120 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 GEMIN7Q9H840 131 aaKnown RBP10.01□□□□□ -0.81
CLN8-204ENST00000519254 ICOSQ9Y6W8 199 aa10.01□□□□□ -0.81
CLN8-204ENST00000519254 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
CLN8-204ENST00000519254 SEC11AP67812 179 aa10□□□□□ -0.81
CLN8-204ENST00000519254 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
CLN8-204ENST00000519254 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
CLN8-204ENST00000519254 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
CLN8-204ENST00000519254 LGALS3P17931 250 aaKnown RBP9.99□□□□□ -0.81
CLN8-204ENST00000519254 MRPL23Q16540 153 aaKnown RBP9.99□□□□□ -0.81
CLN8-204ENST00000519254 HERVK_113P63121 156 aa9.98□□□□□ -0.81
CLN8-204ENST00000519254 TAL2Q16559 108 aa9.98□□□□□ -0.81
CLN8-204ENST00000519254 Q6ZVH6 145 aa9.98□□□□□ -0.81
CLN8-204ENST00000519254 IGHV1-58A0A0C4DH39 117 aa9.98□□□□□ -0.81
CLN8-204ENST00000519254 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms