RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 C3orf79P0CE67 100 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 MRPS36P82909 103 aaKnown RBP5.26□□□□□ -1.57
SDCBP-206ENST00000519115 C2orf66Q6UXQ4 117 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 MRPL52Q86TS9 123 aaKnown RBP5.26□□□□□ -1.57
SDCBP-206ENST00000519115 LINC00518Q8N0U6 118 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 ZNRF2Q8NHG8 242 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 SPANXA1Q9NS26 97 aa5.26□□□□□ -1.57
SDCBP-206ENST00000519115 IGHV3-73A0A0B4J1V6 119 aa5.25□□□□□ -1.57
SDCBP-206ENST00000519115 ZNF25P17030 456 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-206ENST00000519115 PYY3Q5JQD4 70 aa5.25□□□□□ -1.57
SDCBP-206ENST00000519115 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
SDCBP-206ENST00000519115 VSIG2Q96IQ7 327 aa5.25□□□□□ -1.57
SDCBP-206ENST00000519115 SCGB3A1Q96QR1 104 aa5.25□□□□□ -1.57
SDCBP-206ENST00000519115 RYR2Q92736 4967 aa5.25□□□□□ -1.57
SDCBP-206ENST00000519115 TRBV6-8A0A0A6YYG3 113 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 A0A1B0GUV1 79 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 M0R2N4 97 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 CCL25O15444 150 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 S100A12P80511 92 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 ATP6V0E2Q8NHE4 81 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 VPS13DQ5THJ4 4388 aa5.24□□□□□ -1.57
SDCBP-206ENST00000519115 TRBV25-1A0A075B6N4 114 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 A0A087WX48 190 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 SCGB1D1O95968 90 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 PRSS1P07477 247 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 GYPEP15421 78 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 CCL18P55774 89 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 PMVKQ15126 192 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 Q6ZN92 141 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 TEX43Q6ZNM6 134 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 NEGR1Q7Z3B1 354 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 Q8N3U1 123 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 AMELXQ99217 191 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 CHCHD7Q9BUK0 85 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 LINC00588Q9Y4M8 146 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 ICOSQ9Y6W8 199 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 KMT2AQ03164 3969 aa5.23□□□□□ -1.57
SDCBP-206ENST00000519115 A0A096LPF7 62 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 LOC100131303A0A0U1RQF7 123 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 PLNP26678 52 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 KRTDAPP60985 99 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 SEC11AP67812 179 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 FAM19A3Q7Z5A8 133 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 Q8N976 141 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 C12orf57Q99622 126 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 TMEM243Q9BU79 118 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 CST9LQ9H4G1 147 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 Q9UF83 564 aa5.22□□□□□ -1.57
SDCBP-206ENST00000519115 DNAH6Q9C0G6 4158 aa5.21□□□□□ -1.57
SDCBP-206ENST00000519115 GAGE12JA6NER3 117 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 K7EP13 123 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 GAGE1Q13065 139 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 GAGE4Q13068 117 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 GAGE5Q13069 117 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 ODF1Q14990 250 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 ESRGQ1W209 222 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 GAGE13Q4V321 117 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 NTM-AS1Q6ZSK4 140 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 VCX2Q9H322 139 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 UBE2D4Q9Y2X8 147 aa5.21□□□□□ -1.58
SDCBP-206ENST00000519115 TRAV9-2A0A087WT02 112 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 HSBP1L1C9JCN9 74 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 F8VRH5 84 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 DPM2O94777 84 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 LELP1Q5T871 98 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 DGAT2L7PQ6IED9 249 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 NFE4Q86UQ8 179 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 BAALCQ8WXS3 180 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 TMEM101Q96IK0 257 aa5.2□□□□□ -1.58
SDCBP-206ENST00000519115 KIAA1109Q2LD37 5005 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 IGLV4-3A0A075B6K6 122 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 PRSS29PA6NIE9 313 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-206ENST00000519115 UBE2L6O14933 153 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 IGKCP01834 107 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 FGF6P10767 208 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 RPL39P62891 51 aaKnown RBP5.19□□□□□ -1.58
SDCBP-206ENST00000519115 Q6ZR54 194 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 LINC00173Q6ZV60 143 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 ZNF664Q8N3J9 261 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 C2orf88Q9BSF0 95 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 CDC42SE2Q9NRR3 84 aa5.19□□□□□ -1.58
SDCBP-206ENST00000519115 MRPS16Q9Y3D3 137 aaKnown RBP5.19□□□□□ -1.58
SDCBP-206ENST00000519115 NBDYA0A0U1RRE5 68 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 TINCRA0A1B0GVN0 87 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 IGLC3P0DOY3 106 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 LYPD5Q6UWN5 251 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 OR5A1Q8NGJ0 315 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 FAM104AQ969W3 186 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 VAMP8Q9BV40 100 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 KRTAP1-5Q9BYS1 174 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 Q9H8V8 135 aa5.18□□□□□ -1.58
SDCBP-206ENST00000519115 CHTOPQ9Y3Y2 248 aaKnown RBP5.18□□□□□ -1.58
SDCBP-206ENST00000519115 TRAV8-6A0A0B4J262 113 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 C11orf86A6NJI1 115 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 RTL8CO15255 209 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 DLEU1O43261 78 aa5.17□□□□□ -1.58
SDCBP-206ENST00000519115 AMMECR1LQ6DCA0 310 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms