RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 UBE2D2P62837 147 aa0.69□□□□□ -2.3
SCARNA15.2-201ENST00000516409 SSBP3-AS1Q7Z2R9 100 aa0.69□□□□□ -2.3
SCARNA15.2-201ENST00000516409 LINC00472Q9H8W2 130 aa0.69□□□□□ -2.3
SCARNA15.2-201ENST00000516409 PRO1854Q9UHT4 67 aa0.69□□□□□ -2.3
SCARNA15.2-201ENST00000516409 ARL2-SNX15V9GYD0 113 aa0.69□□□□□ -2.3
SCARNA15.2-201ENST00000516409 MYO7AQ13402 2215 aa0.69□□□□□ -2.3
SCARNA15.2-201ENST00000516409 ZNF815PA8K554 130 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 C10orf142B7Z368 130 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 M0R3E3 92 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 PIN1P1O15428 100 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 IGLC1P0CG04 106 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 TRAPPC2P0DI81 140 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 TRAPPC2BP0DI82 140 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 HAMPP81172 84 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 NXT2Q9NPJ8 142 aaKnown RBP0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 MEGF8Q7Z7M0 2845 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 FBN2P35556 2912 aa0.68□□□□□ -2.3
SCARNA15.2-201ENST00000516409 FRAS1Q86XX4 4008 aa0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 COX6CP09669 75 aa0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 COX17Q14061 63 aa0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 FAM223AQ8IWN6 122 aa0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 AP4S1Q9Y587 144 aa0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 KDM5AP29375 1690 aaKnown RBP0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 CCNB3Q8WWL7 1395 aa0.67□□□□□ -2.3
SCARNA15.2-201ENST00000516409 LAMC3Q9Y6N6 1575 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 TET3O43151 1660 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 ZNF609O15014 1411 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 VPS8Q8N3P4 1428 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 PKIAP61925 76 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 PMCHL2Q9BQD1 86 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 SNHG12Q9BXW3 62 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 DPY30Q9C005 99 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 CADP27708 2225 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 HMCN1Q96RW7 5635 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 ABCC10Q5T3U5 1492 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 SHANK2Q9UPX8 1470 aa0.66□□□□□ -2.3
SCARNA15.2-201ENST00000516409 NAV3Q8IVL0 2385 aa0.65□□□□□ -2.3
SCARNA15.2-201ENST00000516409 KIF21AQ7Z4S6 1674 aa0.65□□□□□ -2.3
SCARNA15.2-201ENST00000516409 UBA52P62987 128 aaKnown RBP0.65□□□□□ -2.31
SCARNA15.2-201ENST00000516409 COX6A2Q02221 97 aa0.65□□□□□ -2.31
SCARNA15.2-201ENST00000516409 COL5A1-AS1Q5SY13 56 aa0.65□□□□□ -2.31
SCARNA15.2-201ENST00000516409 FAIMQ9NVQ4 179 aa0.65□□□□□ -2.31
SCARNA15.2-201ENST00000516409 PLAC8Q9NZF1 115 aa0.65□□□□□ -2.31
SCARNA15.2-201ENST00000516409 HMGXB3Q12766 1538 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 NOTCH1P46531 2555 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 A0A0G2JND7 137 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 FAM223BA6NKX1 122 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 MGPP08493 103 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 LINC00032P0C843 101 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 Q6JHZ5 121 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ARHGEF5Q12774 1597 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 MYOM1P52179 1685 aa0.64□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ANKRD36BQ8N2N9 1353 aa0.63□□□□□ -2.31
SCARNA15.2-201ENST00000516409 BCE1O60756 84 aa0.63□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ASXL3Q9C0F0 2248 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 TCHHQ07283 1943 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ABCA3Q99758 1704 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 SPRR4Q96PI1 79 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 VAMP8Q9BV40 100 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 CACFD1Q9UGQ2 172 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 EHBP1L1Q8N3D4 1523 aa0.62□□□□□ -2.31
SCARNA15.2-201ENST00000516409 TEX14Q8IWB6 1497 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 TOP2BQ02880 1626 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 A0A1B0GWA3 101 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ATOX1O00244 68 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 NDUFC1O43677 76 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ASIPP42127 132 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 TOPAZ1Q8N9V7 1692 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 UNC13BO14795 1591 aa0.61□□□□□ -2.31
SCARNA15.2-201ENST00000516409 PRDM15P57071 1507 aaPredicted RBP0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 PRH1P02810 166 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 KRTAP2-3P0C7H8 128 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 SAA2P0DJI9 122 aaPredicted RBP0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 FAUP35544 74 aaKnown RBP0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 TMEM263Q8WUH6 116 aaKnown RBP0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 KRTAP2-4Q9BYR9 128 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 KRTAP2-1Q9BYU5 128 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 LRRC37A2A6NM11 1700 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 CHD1O14646 1710 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 FYCO1Q9BQS8 1478 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 LRP6O75581 1613 aa0.6□□□□□ -2.31
SCARNA15.2-201ENST00000516409 CACNA1HO95180 2353 aa0.59□□□□□ -2.31
SCARNA15.2-201ENST00000516409 NSD3Q9BZ95 1437 aa0.59□□□□□ -2.31
SCARNA15.2-201ENST00000516409 A0A0D9SFI3 127 aa0.59□□□□□ -2.31
SCARNA15.2-201ENST00000516409 C10orf113Q5VZT2 155 aa0.59□□□□□ -2.31
SCARNA15.2-201ENST00000516409 SERP2Q8N6R1 65 aa0.59□□□□□ -2.31
SCARNA15.2-201ENST00000516409 TRGV9Q99603 122 aa0.59□□□□□ -2.31
SCARNA15.2-201ENST00000516409 ADGRL2O95490 1459 aa0.59□□□□□ -2.32
SCARNA15.2-201ENST00000516409 GAPVD1Q14C86 1478 aa0.59□□□□□ -2.32
SCARNA15.2-201ENST00000516409 BTAF1O14981 1849 aa0.59□□□□□ -2.32
SCARNA15.2-201ENST00000516409 APCP25054 2843 aa0.59□□□□□ -2.32
SCARNA15.2-201ENST00000516409 COL4A6Q14031 1691 aa0.59□□□□□ -2.32
SCARNA15.2-201ENST00000516409 ZFHX3Q15911 3703 aa0.59□□□□□ -2.32
SCARNA15.2-201ENST00000516409 ERCC6L2Q5T890 1561 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 C7orf77A4D0Y5 90 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 H7BZZ5 65 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 S100A3P33764 101 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 FDCSPQ8NFU4 85 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 PRO0255Q9UI72 69 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms