RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 RAB26Q9ULW5 256 aa7.07□□□□□ -1.28
SMAD1-216ENST00000515527 C1orf196B1AJZ1 125 aa7.06□□□□□ -1.28
SMAD1-216ENST00000515527 SPINK1P00995 79 aa7.06□□□□□ -1.28
SMAD1-216ENST00000515527 AP3S2P59780 193 aa7.06□□□□□ -1.28
SMAD1-216ENST00000515527 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
SMAD1-216ENST00000515527 VCX3BQ9H321 246 aa7.06□□□□□ -1.28
SMAD1-216ENST00000515527 MT2AP02795 61 aa7.05□□□□□ -1.28
SMAD1-216ENST00000515527 TOMM5Q8N4H5 51 aa7.05□□□□□ -1.28
SMAD1-216ENST00000515527 ORAOV1Q8WV07 137 aa7.05□□□□□ -1.28
SMAD1-216ENST00000515527 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
SMAD1-216ENST00000515527 Q8NBF4 154 aa7.04□□□□□ -1.28
SMAD1-216ENST00000515527 NCR2O95944 276 aa7.03□□□□□ -1.28
SMAD1-216ENST00000515527 COX8CQ7Z4L0 72 aa7.03□□□□□ -1.28
SMAD1-216ENST00000515527 MRPL55Q7Z7F7 128 aaKnown RBP7.03□□□□□ -1.28
SMAD1-216ENST00000515527 PACRGQ96M98 296 aaPredicted RBP7.03□□□□□ -1.28
SMAD1-216ENST00000515527 FUNDC2Q9BWH2 189 aa7.03□□□□□ -1.28
SMAD1-216ENST00000515527 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
SMAD1-216ENST00000515527 ZFP30Q9Y2G7 519 aa7.03□□□□□ -1.28
SMAD1-216ENST00000515527 RPL37AP8A6NKH3 93 aa7.02□□□□□ -1.29
SMAD1-216ENST00000515527 NDUFC2-KCTD14E9PQ53 114 aa7.02□□□□□ -1.29
SMAD1-216ENST00000515527 MARVELD1Q9BSK0 173 aa7.02□□□□□ -1.29
SMAD1-216ENST00000515527 RBM38Q9H0Z9 239 aaKnown RBP7.02□□□□□ -1.29
SMAD1-216ENST00000515527 CXCL1P09341 107 aa7.01□□□□□ -1.29
SMAD1-216ENST00000515527 GCHFRP30047 84 aa7.01□□□□□ -1.29
SMAD1-216ENST00000515527 RAB32Q13637 225 aa7.01□□□□□ -1.29
SMAD1-216ENST00000515527 MDN1Q9NU22 5596 aa7.01□□□□□ -1.29
SMAD1-216ENST00000515527 PEX7O00628 323 aa7□□□□□ -1.29
SMAD1-216ENST00000515527 MT1FP04733 61 aa7□□□□□ -1.29
SMAD1-216ENST00000515527 Q8N377 158 aa7□□□□□ -1.29
SMAD1-216ENST00000515527 TRAV13-1A0A0B4J241 112 aa6.99□□□□□ -1.29
SMAD1-216ENST00000515527 UBE2G2P60604 165 aa6.99□□□□□ -1.29
SMAD1-216ENST00000515527 VCX3AQ9NNX9 186 aa6.99□□□□□ -1.29
SMAD1-216ENST00000515527 CYTL1Q9NRR1 136 aa6.99□□□□□ -1.29
SMAD1-216ENST00000515527 C9orf92A6NGG3 77 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 SLC25A20O43772 301 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 NDUFB6O95139 128 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 UBE2G1P62253 170 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 SCGB1C1Q8TD33 95 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 GPR98Q8WXG9 6306 aa6.98□□□□□ -1.29
SMAD1-216ENST00000515527 CDC34P49427 236 aaPredicted RBP6.97□□□□□ -1.29
SMAD1-216ENST00000515527 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
SMAD1-216ENST00000515527 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
SMAD1-216ENST00000515527 STAG3L2P0CL84 134 aa6.96□□□□□ -1.3
SMAD1-216ENST00000515527 STAG3L3P0CL85 134 aa6.96□□□□□ -1.3
SMAD1-216ENST00000515527 LYZL1Q6UWQ5 148 aa6.96□□□□□ -1.3
SMAD1-216ENST00000515527 LINC00167Q96N53 147 aa6.96□□□□□ -1.3
SMAD1-216ENST00000515527 TPPP3Q9BW30 176 aa6.96□□□□□ -1.3
SMAD1-216ENST00000515527 TMEM167BQ9NRX6 74 aa6.96□□□□□ -1.3
SMAD1-216ENST00000515527 TRBV30A0A0K0K1B3 111 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 PRLHP81277 87 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 RNASE13Q5GAN3 156 aaKnown RBP6.95□□□□□ -1.3
SMAD1-216ENST00000515527 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 MRAP2Q96G30 205 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 FMC1Q96HJ9 113 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 Q9H521 79 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 XAGE1AQ9HD64 81 aa6.95□□□□□ -1.3
SMAD1-216ENST00000515527 GAGE10A6NGK3 116 aa6.94□□□□□ -1.3
SMAD1-216ENST00000515527 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
SMAD1-216ENST00000515527 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
SMAD1-216ENST00000515527 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
SMAD1-216ENST00000515527 A0A1W2PRE2 83 aa6.93□□□□□ -1.3
SMAD1-216ENST00000515527 PYDC2Q56P42 97 aa6.93□□□□□ -1.3
SMAD1-216ENST00000515527 DEDD2Q8WXF8 326 aa6.93□□□□□ -1.3
SMAD1-216ENST00000515527 HIST1H2BAQ96A08 127 aa6.93□□□□□ -1.3
SMAD1-216ENST00000515527 LTAP01374 205 aa6.92□□□□□ -1.3
SMAD1-216ENST00000515527 PMCHP20382 165 aa6.92□□□□□ -1.3
SMAD1-216ENST00000515527 RAB24Q969Q5 203 aa6.92□□□□□ -1.3
SMAD1-216ENST00000515527 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 A6NJY4 79 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 ZNF727A8MUV8 499 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 TRGC1P0CF51 173 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 DEFA1P59665 94 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
SMAD1-216ENST00000515527 PNRC1Q12796 327 aaPredicted RBP6.91□□□□□ -1.3
SMAD1-216ENST00000515527 C2orf82Q6UX34 121 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 GATD1Q8NB37 220 aa6.91□□□□□ -1.3
SMAD1-216ENST00000515527 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
SMAD1-216ENST00000515527 UPK1BO75841 260 aa6.9□□□□□ -1.3
SMAD1-216ENST00000515527 CXorf1O96002 111 aa6.9□□□□□ -1.3
SMAD1-216ENST00000515527 FOXA3P55318 350 aaPredicted RBP6.9□□□□□ -1.3
SMAD1-216ENST00000515527 RPS20P60866 119 aaKnown RBP6.9□□□□□ -1.3
SMAD1-216ENST00000515527 IL15RAQ13261 267 aa6.9□□□□□ -1.3
SMAD1-216ENST00000515527 I3L3M4 83 aa6.89□□□□□ -1.31
SMAD1-216ENST00000515527 FAM19A1Q7Z5A9 133 aa6.89□□□□□ -1.31
SMAD1-216ENST00000515527 CCDC32Q9BV29 185 aa6.89□□□□□ -1.31
SMAD1-216ENST00000515527 SMIM3Q9BZL3 60 aa6.89□□□□□ -1.31
SMAD1-216ENST00000515527 A0A087WXM4 84 aa6.87□□□□□ -1.31
SMAD1-216ENST00000515527 RPL32P62910 135 aaKnown RBP6.87□□□□□ -1.31
SMAD1-216ENST00000515527 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
SMAD1-216ENST00000515527 MZT2BQ6NZ67 158 aa6.87□□□□□ -1.31
SMAD1-216ENST00000515527 CBLN2Q8IUK8 224 aa6.87□□□□□ -1.31
SMAD1-216ENST00000515527 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
SMAD1-216ENST00000515527 C7orf77A4D0Y5 90 aa6.85□□□□□ -1.31
SMAD1-216ENST00000515527 SPRR4Q96PI1 79 aa6.85□□□□□ -1.31
SMAD1-216ENST00000515527 GNB1LQ9BYB4 327 aa6.85□□□□□ -1.31
SMAD1-216ENST00000515527 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
SMAD1-216ENST00000515527 IGHV3OR16-9A0A0B4J2B5 98 aa6.84□□□□□ -1.31
SMAD1-216ENST00000515527 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
SMAD1-216ENST00000515527 HIGD2AQ9BW72 106 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms