RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 SBSPONQ8IVN8 264 aa16.21■□□□□ 0.19
PDE4D-223ENST00000515011 KIR2DL5BQ8NHK3 375 aa16.21■□□□□ 0.19
PDE4D-223ENST00000515011 TRGV4A0A0C4DH28 118 aa16.21■□□□□ 0.19
PDE4D-223ENST00000515011 LINC00612Q8N6U2 182 aa16.21■□□□□ 0.19
PDE4D-223ENST00000515011 X6R8D5 127 aa16.21■□□□□ 0.19
PDE4D-223ENST00000515011 SMIM9A6NGZ8 99 aa16.2■□□□□ 0.18
PDE4D-223ENST00000515011 K7ERJ3 54 aa16.2■□□□□ 0.18
PDE4D-223ENST00000515011 FHL2Q14192 279 aa16.2■□□□□ 0.18
PDE4D-223ENST00000515011 OR5A1Q8NGJ0 315 aa16.2■□□□□ 0.18
PDE4D-223ENST00000515011 NOTCH3Q9UM47 2321 aa16.2■□□□□ 0.18
PDE4D-223ENST00000515011 GTSF1LQ9H1H1 148 aa16.2■□□□□ 0.18
PDE4D-223ENST00000515011 UBE2D1P51668 147 aa16.19■□□□□ 0.18
PDE4D-223ENST00000515011 DGAT2L7PQ6IED9 249 aa16.19■□□□□ 0.18
PDE4D-223ENST00000515011 WFDC9Q8NEX5 89 aa16.19■□□□□ 0.18
PDE4D-223ENST00000515011 CSDC2Q9Y534 153 aaKnown RBP16.19■□□□□ 0.18
PDE4D-223ENST00000515011 LINC00694P0DN24 101 aa16.19■□□□□ 0.18
PDE4D-223ENST00000515011 SPANXB1Q9NS25 103 aaPredicted RBP16.19■□□□□ 0.18
PDE4D-223ENST00000515011 LOC100131303A0A0U1RQF7 123 aa16.18■□□□□ 0.18
PDE4D-223ENST00000515011 NAA38Q9BRA0 125 aaKnown RBP16.18■□□□□ 0.18
PDE4D-223ENST00000515011 IGHV3-64A0A075B6Q5 118 aa16.17■□□□□ 0.18
PDE4D-223ENST00000515011 A0A1B0GWB2 263 aa16.17■□□□□ 0.18
PDE4D-223ENST00000515011 C12orf74Q32Q52 190 aa16.17■□□□□ 0.18
PDE4D-223ENST00000515011 A0A1W2PPM0 123 aa16.16■□□□□ 0.18
PDE4D-223ENST00000515011 SMAGPQ0VAQ4 97 aa16.16■□□□□ 0.18
PDE4D-223ENST00000515011 SRSF9Q13242 221 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDE4D-223ENST00000515011 WIPF1O43516 503 aa16.16■□□□□ 0.18
PDE4D-223ENST00000515011 IGHV3-30-3P0DP02 117 aa16.15■□□□□ 0.18
PDE4D-223ENST00000515011 TIRAPP58753 221 aa16.14■□□□□ 0.17
PDE4D-223ENST00000515011 IGHV1-58A0A0C4DH39 117 aa16.14■□□□□ 0.17
PDE4D-223ENST00000515011 APOC4P55056 127 aa16.14■□□□□ 0.17
PDE4D-223ENST00000515011 SAMD5Q5TGI4 173 aa16.14■□□□□ 0.17
PDE4D-223ENST00000515011 TMEM243Q9BU79 118 aa16.14■□□□□ 0.17
PDE4D-223ENST00000515011 GEMIN7Q9H840 131 aaKnown RBP16.14■□□□□ 0.17
PDE4D-223ENST00000515011 VWFP04275 2813 aa16.14■□□□□ 0.17
PDE4D-223ENST00000515011 TENM1Q9UKZ4 2725 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 IGLV5-45A0A087WSX0 123 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 DEFB130BP0DP73 79 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 DEFB130AP0DP74 79 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 TMEM238LA0A1B0GVL6 79 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 GAGE10A6NGK3 116 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 A6NJY4 79 aa16.13■□□□□ 0.17
PDE4D-223ENST00000515011 TRAV8-3A0A0A6YYJ7 113 aa16.12■□□□□ 0.17
PDE4D-223ENST00000515011 K7EP34 96 aa16.12■□□□□ 0.17
PDE4D-223ENST00000515011 GTF2H5Q6ZYL4 71 aa16.12■□□□□ 0.17
PDE4D-223ENST00000515011 FAM19A3Q7Z5A8 133 aa16.12■□□□□ 0.17
PDE4D-223ENST00000515011 H7C423 109 aa16.11■□□□□ 0.17
PDE4D-223ENST00000515011 VSIG2Q96IQ7 327 aa16.11■□□□□ 0.17
PDE4D-223ENST00000515011 IGHV3-30P01768 117 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 IGHV3-30-5P0DP03 117 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 FABP2P12104 132 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 CDC42SE2Q9NRR3 84 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 IGLL5B9A064 214 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 UBE2L6O14933 153 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 DEFB135Q30KP9 77 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 C10orf126Q8N4M7 172 aa16.1■□□□□ 0.17
PDE4D-223ENST00000515011 SPINK8P0C7L1 97 aa16.09■□□□□ 0.17
PDE4D-223ENST00000515011 CDKN2A-AS1Q9UH64 79 aa16.09■□□□□ 0.17
PDE4D-223ENST00000515011 LYRM9A8MSI8 78 aa16.09■□□□□ 0.17
PDE4D-223ENST00000515011 HERVK_113P63121 156 aa16.09■□□□□ 0.17
PDE4D-223ENST00000515011 LINC00242Q5T6M2 205 aa16.08■□□□□ 0.16
PDE4D-223ENST00000515011 SPCS1Q9Y6A9 102 aa16.08■□□□□ 0.16
PDE4D-223ENST00000515011 A0A0J9YXY3 114 aa16.07■□□□□ 0.16
PDE4D-223ENST00000515011 TMEM101Q96IK0 257 aa16.07■□□□□ 0.16
PDE4D-223ENST00000515011 TRBV6-8A0A0A6YYG3 113 aa16.06■□□□□ 0.16
PDE4D-223ENST00000515011 COX6A2Q02221 97 aa16.06■□□□□ 0.16
PDE4D-223ENST00000515011 FAM222AQ5U5X8 452 aa16.06■□□□□ 0.16
PDE4D-223ENST00000515011 ATRQ13535 2644 aa16.06■□□□□ 0.16
PDE4D-223ENST00000515011 TMEM238C9JI98 176 aa16.05■□□□□ 0.16
PDE4D-223ENST00000515011 NDUFA12Q9UI09 145 aa16.05■□□□□ 0.16
PDE4D-223ENST00000515011 ZFAND6Q6FIF0 208 aa16.04■□□□□ 0.16
PDE4D-223ENST00000515011 TRAV13-1A0A0B4J241 112 aa16.03■□□□□ 0.16
PDE4D-223ENST00000515011 IGHV4-28A0A0C4DH34 117 aa16.03■□□□□ 0.16
PDE4D-223ENST00000515011 KRTAP24-1Q3LI83 254 aa16.03■□□□□ 0.16
PDE4D-223ENST00000515011 A8MZ25 164 aa16.02■□□□□ 0.16
PDE4D-223ENST00000515011 GYPEP15421 78 aa16.02■□□□□ 0.16
PDE4D-223ENST00000515011 PRO0255Q9UI72 69 aa16.02■□□□□ 0.16
PDE4D-223ENST00000515011 IGLV5-39A0A0G2JS06 123 aa16.02■□□□□ 0.15
PDE4D-223ENST00000515011 IGHV4-30-4P0DP06 118 aa16.01■□□□□ 0.15
PDE4D-223ENST00000515011 GAGE6Q13070 117 aa16.01■□□□□ 0.15
PDE4D-223ENST00000515011 LITAFQ99732 161 aa16.01■□□□□ 0.15
PDE4D-223ENST00000515011 Q8NAQ8 132 aa16■□□□□ 0.15
PDE4D-223ENST00000515011 MIFP14174 115 aa16■□□□□ 0.15
PDE4D-223ENST00000515011 ATP6V0E2Q8NHE4 81 aa16■□□□□ 0.15
PDE4D-223ENST00000515011 PGPEP1Q9NXJ5 209 aa15.99■□□□□ 0.15
PDE4D-223ENST00000515011 DEFB4AO15263 64 aa15.99■□□□□ 0.15
PDE4D-223ENST00000515011 CHCHD5Q9BSY4 110 aa15.99■□□□□ 0.15
PDE4D-223ENST00000515011 APOMO95445 188 aa15.98■□□□□ 0.15
PDE4D-223ENST00000515011 RNF183Q96D59 192 aa15.98■□□□□ 0.15
PDE4D-223ENST00000515011 SMIM1B2RUZ4 78 aa15.97■□□□□ 0.15
PDE4D-223ENST00000515011 NDUFA1O15239 70 aa15.97■□□□□ 0.15
PDE4D-223ENST00000515011 CFC1BP0CG36 223 aa15.97■□□□□ 0.15
PDE4D-223ENST00000515011 CFC1P0CG37 223 aa15.97■□□□□ 0.15
PDE4D-223ENST00000515011 MUSTN1Q8IVN3 82 aa15.97■□□□□ 0.15
PDE4D-223ENST00000515011 F5H768 121 aa15.96■□□□□ 0.15
PDE4D-223ENST00000515011 RPL24P83731 157 aaKnown RBP15.96■□□□□ 0.15
PDE4D-223ENST00000515011 SPANXDQ9BXN6 97 aa15.96■□□□□ 0.15
PDE4D-223ENST00000515011 SPANXCQ9NY87 97 aa15.96■□□□□ 0.15
PDE4D-223ENST00000515011 IGLV4-60A0A075B6I1 120 aa15.95■□□□□ 0.14
PDE4D-223ENST00000515011 A4D1N5 150 aa15.95■□□□□ 0.14
PDE4D-223ENST00000515011 PAX4O43316 350 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms