RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MAPKAPK5-AS1Q8N8E1 139 aa7.55□□□□□ -1.2
HTT-213ENST00000513806 TMEM101Q96IK0 257 aa7.55□□□□□ -1.2
HTT-213ENST00000513806 CDC42SE2Q9NRR3 84 aa7.55□□□□□ -1.2
HTT-213ENST00000513806 A0A096LNJ9 63 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 LINC01546A6NGU7 62 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 PRSS29PA6NIE9 313 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 LECT2O14960 151 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 NUPR1O60356 82 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 LINC00614P0C842 121 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 ZNF25P17030 456 aaPredicted RBP7.54□□□□□ -1.2
HTT-213ENST00000513806 LINC00310P59036 64 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 WFDC2Q14508 124 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 CYSLTR1Q9Y271 337 aa7.54□□□□□ -1.2
HTT-213ENST00000513806 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
HTT-213ENST00000513806 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
HTT-213ENST00000513806 K7EP13 123 aa7.53□□□□□ -1.2
HTT-213ENST00000513806 BAGE3Q86Y29 109 aa7.53□□□□□ -1.2
HTT-213ENST00000513806 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
HTT-213ENST00000513806 PSCAO43653 123 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BKO60814 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BJP06899 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BOP23527 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BBP33778 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BDP58876 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BCP62807 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST2H2BEQ16778 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.52□□□□□ -1.21
HTT-213ENST00000513806 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 BAALCQ8WXS3 180 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BHQ93079 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 TOMM6Q96B49 74 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BNQ99877 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 HIST1H2BMQ99879 126 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 TIMM21Q9BVV7 248 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 C1orf43Q9BWL3 253 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 SPANXA1Q9NS26 97 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
HTT-213ENST00000513806 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 LINC00959A0A1B0GUT2 108 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 GAGE12HA6NDE8 117 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 IGIPA6NJ69 53 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 K7EMI3 77 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 SERF1AO75920 110 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 Q0VG73 95 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 MIAQ16674 131 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 NFE4Q86UQ8 179 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 SCGB3A1Q96QR1 104 aa7.51□□□□□ -1.21
HTT-213ENST00000513806 XCL1P47992 114 aa7.5□□□□□ -1.21
HTT-213ENST00000513806 LINC00173Q6ZV60 143 aa7.5□□□□□ -1.21
HTT-213ENST00000513806 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
HTT-213ENST00000513806 CSDC2Q9Y534 153 aaKnown RBP7.5□□□□□ -1.21
HTT-213ENST00000513806 HECTD4Q9Y4D8 3996 aa7.5□□□□□ -1.21
HTT-213ENST00000513806 A0A087WTM6 91 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 IFITM10A6NMD0 228 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 CCL25O15444 150 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 RAB5BP61020 215 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
HTT-213ENST00000513806 RMI2Q96E14 147 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 TMEM141Q96I45 108 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 TM2D2Q9BX73 214 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 PYGO1Q9Y3Y4 419 aa7.49□□□□□ -1.21
HTT-213ENST00000513806 A0A1B0GVY2 172 aa7.48□□□□□ -1.21
HTT-213ENST00000513806 HBDP02042 147 aa7.48□□□□□ -1.21
HTT-213ENST00000513806 SMAGPQ0VAQ4 97 aa7.48□□□□□ -1.21
HTT-213ENST00000513806 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
HTT-213ENST00000513806 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
HTT-213ENST00000513806 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
HTT-213ENST00000513806 TRAV8-4A0A0B4J246 113 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 HSBP1O75506 76 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 NDUFA6P56556 154 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 COX6A2Q02221 97 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 FOXI1Q12951 378 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 SS18Q15532 418 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 LINC00336Q6ZUF6 198 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 ERASQ7Z444 233 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 AMELXQ99217 191 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 TIMM17AQ99595 171 aa7.47□□□□□ -1.21
HTT-213ENST00000513806 DNAH5Q8TE73 4624 aa7.46□□□□□ -1.21
HTT-213ENST00000513806 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.46□□□□□ -1.22
HTT-213ENST00000513806 C5orf38Q86SI9 138 aa7.46□□□□□ -1.22
HTT-213ENST00000513806 VCX2Q9H322 139 aa7.46□□□□□ -1.22
HTT-213ENST00000513806 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
HTT-213ENST00000513806 FABP4P15090 132 aa7.45□□□□□ -1.22
HTT-213ENST00000513806 G0S2P27469 103 aa7.45□□□□□ -1.22
HTT-213ENST00000513806 UBE2D1P51668 147 aa7.45□□□□□ -1.22
HTT-213ENST00000513806 Q6ZN92 141 aa7.45□□□□□ -1.22
HTT-213ENST00000513806 SPATA12Q7Z6I5 190 aa7.45□□□□□ -1.22
HTT-213ENST00000513806 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
HTT-213ENST00000513806 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
HTT-213ENST00000513806 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
HTT-213ENST00000513806 HIGD2BQ4VC39 106 aa7.44□□□□□ -1.22
HTT-213ENST00000513806 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
HTT-213ENST00000513806 LINC00526Q96FQ7 95 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms