RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 TNXBP22105 4242 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 NBEAL1Q6ZS30 2694 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 SPAARA0A1B0GVQ0 90 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 MIF4GDA9UHW6 222 aaKnown RBP-0.17□□□□□ -2.44
DHFR-207ENST00000513314 APOC2P02655 101 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 SPRR2DP22532 72 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 Q56UQ5 140 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 C10orf71Q711Q0 1435 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 MYOZ3Q8TDC0 251 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 FAIMQ9NVQ4 179 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 NWD2Q9ULI1 1742 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 TENM2Q9NT68 2774 aa-0.17□□□□□ -2.44
DHFR-207ENST00000513314 TRBV7-3A0A075B6L6 115 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 LOC285095A0A1B0GVY8 99 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 IGLC7A0M8Q6 106 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 K7EQZ3 153 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 UBA52P62987 128 aaKnown RBP-0.18□□□□□ -2.44
DHFR-207ENST00000513314 CATR1Q13166 79 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 Q8N8P6 123 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 FDCSPQ8NFU4 85 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 TSLPQ969D9 159 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 LSM10Q969L4 123 aaKnown RBP-0.18□□□□□ -2.44
DHFR-207ENST00000513314 SNRNP25Q9BV90 132 aaKnown RBP-0.18□□□□□ -2.44
DHFR-207ENST00000513314 LINC00470Q9BZP3 86 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 VWFP04275 2813 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 MAP1AP78559 2803 aaPredicted RBP-0.18□□□□□ -2.44
DHFR-207ENST00000513314 FAT1Q14517 4588 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 RYR3Q15413 4870 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 SETD2Q9BYW2 2564 aaPredicted RBP-0.18□□□□□ -2.44
DHFR-207ENST00000513314 MYCBP2O75592 4640 aa-0.18□□□□□ -2.44
DHFR-207ENST00000513314 SIPA1L3O60292 1781 aaPredicted RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 SPTBN1Q01082 2364 aaKnown RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 NAIPQ13075 1403 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 PLXNB2O15031 1838 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 GOLGA4Q13439 2230 aaKnown RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 TEP1Q99973 2627 aaKnown RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 COX6B1P14854 86 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 Q6AWC8 147 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 MRPL54Q6P161 138 aaKnown RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 C8orf59Q8N0T1 100 aaPredicted RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 NDUFA4L2Q9NRX3 87 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 PPRC1Q5VV67 1664 aaKnown RBP-0.19□□□□□ -2.44
DHFR-207ENST00000513314 ARAP2Q8WZ64 1704 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 KDM3BQ7LBC6 1761 aa-0.19□□□□□ -2.44
DHFR-207ENST00000513314 CSMD3Q7Z407 3707 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 HSPG2P98160 4391 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 RYR1P21817 5038 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 KIAA1109Q2LD37 5005 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 LRP6O75581 1613 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 CHD6Q8TD26 2715 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 COL6A3P12111 3177 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 MYO7BQ6PIF6 2116 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 CFTRP13569 1480 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 FLNBO75369 2602 aaKnown RBP-0.2□□□□□ -2.44
DHFR-207ENST00000513314 CEP152O94986 1710 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 CHKB-CPT1BH3BT56 60 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 HMGN4O00479 90 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 SPINK4O60575 86 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 SFT2D2O95562 160 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 PRM1P04553 51 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 MT4P47944 62 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 KRTAP19-8Q3LI54 63 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.2□□□□□ -2.44
DHFR-207ENST00000513314 UQCR10Q9UDW1 63 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 LINC01558Q9Y6Z2 57 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 UBR4Q5T4S7 5183 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
DHFR-207ENST00000513314 USH2AO75445 5202 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 POLA1P09884 1462 aaPredicted RBP-0.21□□□□□ -2.44
DHFR-207ENST00000513314 GRIN2AQ12879 1464 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 SHANK2Q9UPX8 1470 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 MXRA5Q9NR99 2828 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 CSPG4Q6UVK1 2322 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 ITPR3Q14573 2671 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 SSSCA1O60232 199 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 MGPP08493 103 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 AKAIN1P0CW23 69 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 SPRR2BP35325 72 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 SPANXDQ9BXN6 97 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 MAP1BP46821 2468 aaKnown RBP-0.21□□□□□ -2.44
DHFR-207ENST00000513314 LPAP08519 4548 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 USP9XQ93008 2570 aaPredicted RBP-0.21□□□□□ -2.44
DHFR-207ENST00000513314 LRRC37A2A6NM11 1700 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 PRDM2Q13029 1718 aa-0.21□□□□□ -2.44
DHFR-207ENST00000513314 LAMA5O15230 3695 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 STARD9Q9P2P6 4700 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 PXDNQ92626 1479 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 WDR7Q9Y4E6 1490 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 DOCK2Q92608 1830 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 LRP1BQ9NZR2 4599 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 APC2O95996 2303 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 SYS1-DBNDD2H3BUS1 97 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 I3L2K1 104 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 SNAPC5O75971 98 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 SPRR1BP22528 89 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 WHAMMP3Q1A5X7 153 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 KRTAP20-2Q3LI61 65 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 AMELXQ99217 191 aa-0.22□□□□□ -2.44
DHFR-207ENST00000513314 NXT2Q9NPJ8 142 aaKnown RBP-0.22□□□□□ -2.44
DHFR-207ENST00000513314 LAMA2P24043 3122 aaKnown RBP-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms